RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 NDFIP2Q9NV92 336 aa21.45■■□□□ 1.02
CD47-202ENST00000361309 KIAA1468Q9P260 1216 aa21.45■■□□□ 1.02
CD47-202ENST00000361309 SPASTQ9UBP0 616 aa21.45■■□□□ 1.02
CD47-202ENST00000361309 APOBEC3BQ9UH17 382 aaKnown RBP21.45■■□□□ 1.02
CD47-202ENST00000361309 TMEM59LQ9UK28 342 aa21.45■■□□□ 1.02
CD47-202ENST00000361309 PMS2P1A4D2B8 440 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 CASC3O15234 703 aaKnown RBP21.44■■□□□ 1.02
CD47-202ENST00000361309 ADKP55263 362 aaKnown RBP21.44■■□□□ 1.02
CD47-202ENST00000361309 SKOR1P84550 965 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 C1orf61Q13536 156 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 MAN2A1Q16706 1144 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 PRRT3Q5FWE3 981 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 CENPTQ96BT3 561 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 PNMA8BQ9ULN7 279 aaPredicted RBP21.44■■□□□ 1.02
CD47-202ENST00000361309 PCDHGA8Q9Y5G5 932 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 UNC13CQ8NB66 2214 aa21.44■■□□□ 1.02
CD47-202ENST00000361309 LRP4O75096 1905 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 KRIT1O00522 736 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 TCEA3O75764 348 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 UGT2B4P06133 528 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 RPIAP49247 311 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 THOP1P52888 689 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 ATP11AP98196 1134 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 PTK2BQ14289 1009 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 BECN1Q14457 450 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 CAMK4Q16566 473 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 RAB6CQ53S08 254 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 SLC35F3Q8IY50 421 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 PHACTR4Q8IZ21 702 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 GLMNQ92990 594 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 VOPP1Q96AW1 172 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 CCDC97Q96F63 343 aaPredicted RBP21.43■■□□□ 1.02
CD47-202ENST00000361309 KLHL32Q96NJ5 620 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 RAB6CQ9H0N0 254 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 FHOD1Q9Y613 1164 aa21.43■■□□□ 1.02
CD47-202ENST00000361309 CXorf51AA0A1B0GTR3 108 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 CDRT15L2A8MXV6 281 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 K7ENP7 123 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 IGFALSP35858 605 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 ETFBP38117 255 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 POLD3Q15054 466 aaPredicted RBP21.42■■□□□ 1.02
CD47-202ENST00000361309 TPD52L1Q16890 204 aaPredicted RBP21.42■■□□□ 1.02
CD47-202ENST00000361309 LRRC73Q5JTD7 316 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 C6orf132Q5T0Z8 1188 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 RWDD4Q6NW29 188 aaKnown RBP21.42■■□□□ 1.02
CD47-202ENST00000361309 INO80CQ6PI98 192 aaPredicted RBP21.42■■□□□ 1.02
CD47-202ENST00000361309 LEKR1Q6ZMV7 388 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 VPS36Q86VN1 386 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 EMC1Q8N766 993 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 OR2AP1Q8NGE2 309 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 WDR36Q8NI36 951 aaKnown RBP21.42■■□□□ 1.02
CD47-202ENST00000361309 CPA5Q8WXQ8 436 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 ARHGEF2Q92974 986 aaKnown RBP21.42■■□□□ 1.02
CD47-202ENST00000361309 LRRC61Q9BV99 259 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 NDST4Q9H3R1 872 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 OR12D3Q9UGF7 316 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 DNAI1Q9UI46 699 aa21.42■■□□□ 1.02
CD47-202ENST00000361309 SCN8AQ9UQD0 1980 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 LMO7DNF2Z398 122 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 AREL1O15033 823 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 POP4O95707 220 aaKnown RBP21.41■■□□□ 1.02
CD47-202ENST00000361309 LSM8O95777 96 aaKnown RBP21.41■■□□□ 1.02
CD47-202ENST00000361309 GSRP00390 522 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 ANXA6P08133 673 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 C6P13671 934 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 GEMIN4P57678 1058 aaKnown RBP21.41■■□□□ 1.02
CD47-202ENST00000361309 SNRPD1P62314 119 aaKnown RBP21.41■■□□□ 1.02
CD47-202ENST00000361309 CDO1Q16878 200 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 MYLK3Q32MK0 819 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 FAXCQ5TGI0 409 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 MANEALQ5VSG8 457 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 KIAA1614Q5VZ46 1190 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 ARCQ7LC44 396 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 NOP9Q86U38 636 aaKnown RBP21.41■■□□□ 1.02
CD47-202ENST00000361309 NLRP14Q86W24 1093 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 ARL14Q8N4G2 192 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 MSANTD4Q8NCY6 345 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 NAT6Q93015 286 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 ARHGEF26Q96DR7 871 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 CCDC3Q9BQI4 270 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 OSBPL1AQ9BXW6 950 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 SLC13A1Q9BZW2 595 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 CLPBQ9H078 707 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 SYNDIG1Q9H7V2 258 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 METTL5Q9NRN9 209 aaKnown RBP21.41■■□□□ 1.02
CD47-202ENST00000361309 HPCAL4Q9UM19 191 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 ANKRD36A6QL64 1941 aa21.41■■□□□ 1.02
CD47-202ENST00000361309 AHCTF1Q8WYP5 2266 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 B8ZZF3 427 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 MMP20O60882 483 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 TNFSF15O95150 251 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 MMEP08473 750 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 PRKCSHP14314 528 aaPredicted RBP21.4■■□□□ 1.02
CD47-202ENST00000361309 TSHRP16473 764 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 RHOQP17081 205 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 ADRA1BP35368 520 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 MAPKAPK2P49137 400 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 PDX1P52945 283 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 YPEL5P62699 121 aa21.4■■□□□ 1.02
CD47-202ENST00000361309 NOMO3P69849 1222 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms