RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 HECTD3Q5T447 861 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 AFMIDQ63HM1 303 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 RTL3Q8N8U3 475 aaKnown RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 ATP6V0D2Q8N8Y2 350 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 TTC16Q8NEE8 873 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 OVCA2Q8WZ82 227 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 SLC7A6OSQ96CW6 309 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 PPP1R2P1Q96PQ5 205 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 LRMDAQ9H2I8 198 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 PCMTD2Q9NV79 361 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 BRWD1Q9NSI6 2320 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 C2orf16Q68DN1 1984 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 LIN7AO14910 233 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 CNTFP26441 200 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 MGAT1P26572 445 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 HOXA9P31269 272 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 SESN3P58005 492 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 TIGD7Q6NT04 549 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 SH2D5Q6ZV89 423 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 OTOAQ7RTW8 1153 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 ATPAF2Q8N5M1 289 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 C10orf82Q8WW14 230 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 SMG7Q92540 1137 aaKnown RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 NUDCD1Q96RS6 583 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 CASS4Q9NQ75 786 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 SMPD4Q9NXE4 827 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 ZDHHC7Q9NXF8 308 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 PPARGC1AQ9UBK2 798 aaKnown RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 DPP7Q9UHL4 492 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 DENND4CQ5VZ89 1909 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SLC12A8A0AV02 714 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 ARHGAP42A6NI28 874 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 F5H423 210 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 XYLBO75191 536 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 MOCS2O96007 188 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 C1RP00736 705 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 JCHAINP01591 159 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 PDHA1P08559 390 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 HNRNPA1P09651 372 aaKnown RBP eCLIP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 PTPN2P17706 415 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 ADRA1DP25100 572 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SKIV2L2P42285 1042 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SESN2P58004 480 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 PDK4Q16654 411 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 RARS2Q5T160 578 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SNX30Q5VWJ9 437 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 CASC4Q6P4E1 433 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 CDKL2Q92772 493 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 OXNAD1Q96HP4 312 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 NAF1Q96HR8 494 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 AGAP3Q96P47 875 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 MMADHCQ9H3L0 296 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SMYD2Q9NRG4 433 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 MAGEB16A2A368 324 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 DFFAO00273 331 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SCAMP3O14828 347 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 MATN3O15232 486 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 POLBP06746 335 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 NFKB1P19838 968 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 ATP5C1P36542 298 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 NPY2RP49146 381 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 DLX2Q07687 328 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 FRG1Q14331 258 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SEPT7Q16181 437 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 PABPC1LQ4VXU2 614 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 LRRC23Q53EV4 343 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SPANXN3Q5MJ09 141 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 TRMT10BQ6PF06 316 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 MARK2Q7KZI7 788 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 MTDHQ86UE4 582 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 ZNF276Q8N554 614 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 ARL14EPQ8N8R7 260 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SHKBP1Q8TBC3 707 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 ING5Q8WYH8 240 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 APOPT1Q96IL0 206 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 BTN2A3PQ96KV6 586 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 CDCA3Q99618 268 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 IL12RB2Q99665 862 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 SLC39A8Q9C0K1 460 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 OCEL1Q9H607 264 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 LRRC40Q9H9A6 602 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 RNPEPL1Q9HAU8 725 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 GKN1Q9NS71 199 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 BFARQ9NZS9 450 aa14.05□□□□□ -0.16
CSNK1E-201ENST00000359867 MAFKO60675 156 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 RHOQP17081 205 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 KCNQ1P51787 676 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 KPNA1P52294 538 aaPredicted RBP14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 RING1Q06587 406 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 PIK3R6Q5UE93 754 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 Q7L0L9 218 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 LINC00523Q86TU6 105 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 ZNF683Q8IZ20 524 aa14.04□□□□□ -0.16
CSNK1E-201ENST00000359867 RFWD2Q8NHY2 731 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms