RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 KCTD4Q8WVF5 259 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 PWWP2AQ96N64 755 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 GORASP1Q9BQQ3 440 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 LRMDAQ9H2I8 198 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 NKIRAS2Q9NYR9 191 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 VPS4AQ9UN37 437 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 ANGPT4Q9Y264 503 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 GPR75-ASB3A0A0A6YYF3 556 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 RBMXL2O75526 392 aaKnown RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 SLC25A12O75746 678 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 BUD31P41223 144 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 NAGLUP54802 743 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 MAPKAPK3Q16644 382 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 RETSATQ6NUM9 610 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 ZBTB45Q96K62 511 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 MECRQ9BV79 373 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
COL18A1-203ENST00000359759 TAS2R14Q9NYV8 317 aa16.17■□□□□ 0.18
COL18A1-203ENST00000359759 OR10H2O60403 315 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 UQCRBP14927 111 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 TRAP1Q12931 704 aaKnown RBP16.16■□□□□ 0.18
COL18A1-203ENST00000359759 GRB14Q14449 540 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 GRIK4Q16099 956 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 RCN3Q96D15 328 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 SAMHD1Q9Y3Z3 626 aaKnown RBP16.16■□□□□ 0.18
COL18A1-203ENST00000359759 G3V2T6 193 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 LYPLA1O75608 230 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-203ENST00000359759 IRF8Q02556 426 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 IL18Q14116 193 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 SLC15A2Q16348 729 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 NEK5Q6P3R8 708 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 UNC5AQ6ZN44 842 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 SLCO6A1Q86UG4 719 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 NPAS2Q99743 824 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 FNDC11Q9BVV2 318 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 GPSM3Q9Y4H4 160 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 U3KQV3 271 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 TRIM38O00635 465 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 CSF1RP07333 972 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 CHKAP35790 457 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 PPP2R2BQ00005 443 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 ZNHIT3Q15649 155 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-203ENST00000359759 TEX47Q8TBZ9 253 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 TLR10Q9BXR5 811 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 CDC40O60508 579 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■■□□ 16.3
COL18A1-203ENST00000359759 KDELR1P24390 212 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 CAP2P40123 477 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 CBX3Q13185 183 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 INTS11Q5TA45 600 aaKnown RBP16.16■□□□□ 0.18
COL18A1-203ENST00000359759 CNSTQ6PJW8 725 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 RBM43Q6ZSC3 357 aaKnown RBP16.16■□□□□ 0.18
COL18A1-203ENST00000359759 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 DSELQ8IZU8 1212 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 PIH1D2Q8WWB5 315 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 ZNHIT2Q9UHR6 403 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 ZNF432O94892 652 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 ATP5BP06576 529 aaKnown RBP16.16■□□□□ 0.18
COL18A1-203ENST00000359759 USP45Q70EL2 814 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 ARHGDIBP52566 201 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 NAB1Q13506 487 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 STXBP5Q5T5C0 1151 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 LPCAT4Q643R3 524 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 PAGE2Q7Z2X7 111 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 C12orf56Q8IXR9 622 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 TNS4Q8IZW8 715 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 S100ZQ8WXG8 99 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 TBC1D24Q9ULP9 559 aa16.16■□□□□ 0.18
COL18A1-203ENST00000359759 TCF4P15884 667 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 MTTPP55157 894 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 SREBF2Q12772 1141 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 SMCO1Q147U7 214 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PTPN20Q4JDL3 420 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PSTKQ8IV42 348 aaKnown RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 CDYL2Q8N8U2 506 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 ATL1Q8WXF7 558 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PPP1R14BQ96C90 147 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 CCDC115Q96NT0 180 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 GNPTGQ9UJJ9 305 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 DHRS7Q9Y394 339 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 OR10H1Q9Y4A9 318 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PCDHB12Q9Y5F1 795 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 NRP2O60462 931 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 UNC5CO95185 931 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PGK1P00558 417 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 FSTL1Q12841 308 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 ABRQ12979 859 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 SLC5A9Q2M3M2 681 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PREPLQ4J6C6 727 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PIWIL2Q8TC59 973 aaKnown RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 SERPINB11Q96P15 392 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 LEF1Q9UJU2 399 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PRODHO43272 600 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 ANXA5P08758 320 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 NR1H2P55055 460 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 RRP1BQ14684 758 aaKnown RBP16.15■□□□□ 0.18
COL18A1-203ENST00000359759 PARP6Q2NL67 630 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 XKR6Q5GH73 641 aa16.15■□□□□ 0.18
COL18A1-203ENST00000359759 RNF43Q68DV7 783 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms