RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
CCDC197-201ENST00000359253 WBP2Q969T9 261 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 SGSM3Q96HU1 749 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 FEM1AQ9BSK4 669 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 FICDQ9BVA6 458 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 PLAC1Q9HBJ0 212 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 NKIRAS1Q9NYS0 192 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 CTNNAL1Q9UBT7 734 aa13.67□□□□□ -0.22
CCDC197-201ENST00000359253 ATG2AQ2TAZ0 1938 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 HEATR9A2RTY3 570 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 PMPCBO75439 489 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 MT-ND3P03897 115 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 FGF1P05230 155 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 ALADP13716 330 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 CCR2P41597 374 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 CD86P42081 329 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 SERPINH1P50454 418 aaKnown RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 SGSHP51688 502 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 GNGT1P63211 74 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 NIPAL4Q0D2K0 466 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 MTM1Q13496 603 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 DMC1Q14565 340 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 GRTP1Q5TC63 336 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 PDPK2PQ6A1A2 396 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 DENND5AQ6IQ26 1287 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 TIFABQ6ZNK6 161 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 BBS7Q8IWZ6 715 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 SRRM1Q8IYB3 904 aaKnown RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 CYP4X1Q8N118 509 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 PPM1NQ8N819 430 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 IFT43Q96FT9 208 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 CERS2Q96G23 380 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 ZNF419Q96HQ0 510 aaPredicted RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 NUDCD1Q96RS6 583 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 CPNE1Q99829 537 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 SEMA3CQ99985 751 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 SELENOSQ9BQE4 189 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 SLC2A11Q9BYW1 496 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 TRABDQ9H4I3 376 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 CCDC134Q9H6E4 229 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 PIDD1Q9HB75 910 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 INTS9Q9NV88 658 aaKnown RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 HCFC1R1Q9NWW0 138 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 UBP1Q9NZI7 540 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 TXNDC16Q9P2K2 825 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 OR51B4Q9Y5P0 310 aa13.66□□□□□ -0.22
CCDC197-201ENST00000359253 MYO18AQ92614 2054 aaKnown RBP13.66□□□□□ -0.22
CCDC197-201ENST00000359253 FAM47DPA6NHR8 397 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CBX4O00257 560 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 INSIG1O15503 277 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 ATP9BO43861 1147 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 USP12O75317 370 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 ZMPSTE24O75844 475 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 ZWINTO95229 277 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 MMP2P08253 660 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CHN1P15882 459 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CR2P20023 1033 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 HADHAP40939 763 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 MAPK8P45983 427 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CSNK1DP48730 415 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 POLD2P49005 469 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CSE1LP55060 971 aaKnown RBP13.65□□□□□ -0.22
CCDC197-201ENST00000359253 TFF2Q03403 129 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CDK18Q07002 472 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 USP4Q13107 963 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CBX2Q14781 532 aaPredicted RBP13.65□□□□□ -0.22
CCDC197-201ENST00000359253 SLC1A5Q15758 541 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CERCAMQ5T4B2 595 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 LEKR1Q6ZMV7 388 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 LMNTD2Q8IXW0 634 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 PGBD5Q8N414 524 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 CELF5Q8N6W0 485 aaKnown RBP13.65□□□□□ -0.22
CCDC197-201ENST00000359253 ACMSDQ8TDX5 336 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 MZB1Q8WU39 189 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
CCDC197-201ENST00000359253 ZNF669Q96BR6 464 aaPredicted RBP13.65□□□□□ -0.22
CCDC197-201ENST00000359253 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
CCDC197-201ENST00000359253 KCNK9Q9NPC2 374 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 ZFATQ9P243 1243 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 VPS28Q9UK41 221 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 MRPS23Q9Y3D9 190 aaKnown RBP13.65□□□□□ -0.22
CCDC197-201ENST00000359253 TCAF1Q9Y4C2 921 aa13.65□□□□□ -0.22
CCDC197-201ENST00000359253 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.23
CCDC197-201ENST00000359253 EYSQ5T1H1 3165 aa13.65□□□□□ -0.23
CCDC197-201ENST00000359253 REV3LO60673 3130 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 ZCWPW2A0A1B0GU75 182 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 TMEM120BA0PK00 339 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 TM9SF1O15321 606 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 PENKP01210 267 aaPredicted RBP13.64□□□□□ -0.23
CCDC197-201ENST00000359253 GJA1P17302 382 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 LSP1P33241 339 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 SPRP35270 261 aaPredicted RBP13.64□□□□□ -0.23
CCDC197-201ENST00000359253 GP5P40197 560 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 DSC2Q02487 901 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 SULT2A1Q06520 285 aa13.64□□□□□ -0.23
CCDC197-201ENST00000359253 CYTH1Q15438 398 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms