RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ELMO1Q92556 727 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 RBM4BQ9BQ04 359 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 RBM4Q9BWF3 364 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 KLHL1Q9NR64 748 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 CCDC167Q9P0B6 97 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM59LQ9UK28 342 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SNX8Q9Y5X2 465 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 A0A1W2PPW3 197 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TCRBV7S2A1N4TA0A589 114 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ELP6Q0PNE2 266 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TNFAIP1Q13829 316 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 AKAP1Q92667 903 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TTYH3Q9C0H2 523 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 COL15A1P39059 1388 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 USP31Q70CQ4 1352 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 OR6B1O95007 311 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 HMGCRP04035 888 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 UGT2B4P06133 528 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 RPL22P35268 128 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GCNT1Q02742 428 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 VWA5B1Q5TIE3 1220 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SUSD4Q5VX71 490 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PTF1AQ7RTS3 328 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PDCD10Q9BUL8 212 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MECRQ9BV79 373 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TBC1D13Q9NVG8 400 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PHF11Q9UIL8 331 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 OTOFQ9HC10 1997 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 NRP2O60462 931 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 S100A3P33764 101 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MSX2P35548 267 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 OR52E8Q6IFG1 317 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM126BQ8IUX1 230 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MRPL48Q96GC5 212 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PANX3Q96QZ0 392 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 GAD1Q99259 594 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 EBNA1BP2Q99848 306 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SNX15Q9NRS6 342 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 RGS18Q9NS28 235 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 AP4E1Q9UPM8 1137 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PCDHA10Q9Y5I2 948 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 OR7A10O76100 309 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 LTFP02788 710 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ACADSBP45954 432 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ACOT2P49753 483 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CNTN1Q12860 1018 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 HTR3CQ8WXA8 447 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 HERC2P3Q9BVR0 1158 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MAF1Q9H063 256 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CUEDC1Q9NWM3 386 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MAP3K20Q9NYL2 800 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SFMBT1Q9UHJ3 866 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MAGEL2Q9UJ55 1249 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PTPN20Q4JDL3 420 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM214Q6NUQ4 689 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CNSTQ6PJW8 725 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CLEC10AQ8IUN9 316 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SH3KBP1Q96B97 665 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 KIF12Q96FN5 646 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 A0A087X1B8 175 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 FAM95CA0A1B0GW59 222 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 I3L521 148 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TOP3BO95985 862 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 HIST1H2AGP0C0S8 130 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 HIST1H2ADP20671 130 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TIE1P35590 1138 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ABCG1P45844 678 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SLC18A1P54219 525 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 VPS72Q15906 364 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SWSAP1Q6NVH7 229 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF549Q6P9A3 640 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PIWIL4Q7Z3Z4 852 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MPP5Q8N3R9 675 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 HIST1H2AHQ96KK5 128 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 HIST1H2AJQ99878 128 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 H2AFJQ9BTM1 129 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PTBP2Q9UKA9 531 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 hCG_1818297A0A087WSY0 165 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 RGS4P49798 205 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ADGRD1Q6QNK2 874 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CUZD1Q86UP6 607 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 GFM1Q96RP9 751 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SALL4Q9UJQ4 1053 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 STON1Q9Y6Q2 735 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TULP4Q9NRJ4 1543 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 A0A0B4J269 797 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 HACD1B0YJ81 288 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CYP2C8P10632 490 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 FMO3P31513 532 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TMBIM6P55061 237 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MRNIPQ6NTE8 343 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TAF8Q7Z7C8 310 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 LARGE2Q8N3Y3 721 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PIH1D2Q8WWB5 315 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 KCTD10Q9H3F6 313 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PTPRHQ9HD43 1115 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ERI2A8K979 691 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CENPBD1B2RD01 187 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 AZIN1O14977 448 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 POU5F1Q01860 360 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms