RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 MARCH5Q9NX47 278 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 TMEM161AQ9NX61 479 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 COPG2Q9UBF2 871 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 SLC4A7Q9Y6M7 1214 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 COMMD3-BMI1R4GMX3 469 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 SLC12A8A0AV02 714 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 ARVCFO00192 962 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 C2P06681 752 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 SELPP16109 830 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 RPL17P18621 184 aaKnown RBP16.2■□□□□ 0.18
PTPN5-201ENST00000358540 YWHAQP27348 245 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 CDK7P50613 346 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 DSG1Q02413 1049 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 DUSP4Q13115 394 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 NCSTNQ92542 709 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 FCRL5Q96RD9 977 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 CCSER2Q9H7U1 834 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 THAP1Q9NVV9 213 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 ANGPTL2Q9UKU9 493 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 TMCO1Q9UM00 188 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 TLR6Q9Y2C9 796 aa16.2■□□□□ 0.18
PTPN5-201ENST00000358540 AAR2Q9Y312 384 aaKnown RBP16.2■□□□□ 0.18
PTPN5-201ENST00000358540 SLC10A7Q0GE19 358 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 UBAP2LQ14157 1087 aaKnown RBP16.19■□□□□ 0.18
PTPN5-201ENST00000358540 CNGA3Q16281 694 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 LRRC36Q1X8D7 754 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 VWA5B1Q5TIE3 1220 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 ZNF280DQ6N043 979 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 FBXO27Q8NI29 283 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 SLC39A13Q96H72 371 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 FBXO44Q9H4M3 255 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 KCNK4Q9NYG8 393 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 VWA8A3KMH1 1905 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 TMEM189-UBE2V1I3L0A0 370 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 CCL22O00626 93 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 GABRB3P28472 473 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN5-201ENST00000358540 SLC41A1Q8IVJ1 513 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 CFAP61Q8NHU2 1237 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 PSMG2Q969U7 264 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 MRGPRX2Q96LB1 330 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 C8orf48Q96LL4 319 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 CASD1Q96PB1 797 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 ECSITQ9BQ95 431 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 MARCH2Q9P0N8 246 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 LRFN2Q9ULH4 789 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 MTMR11A4FU01 709 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 PQBP1O60828 265 aaKnown RBP16.19■□□□□ 0.18
PTPN5-201ENST00000358540 RNASEH1O60930 286 aaKnown RBP16.19■□□□□ 0.18
PTPN5-201ENST00000358540 VNN2O95498 520 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 CPA3P15088 417 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 SPDYAQ5MJ70 313 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 FBXL22Q6P050 247 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 PKN3Q6P5Z2 889 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 LINC00523Q86TU6 105 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 ST13P4Q8IZP2 240 aaPredicted RBP16.19■□□□□ 0.18
PTPN5-201ENST00000358540 BCL7CQ8WUZ0 217 aaPredicted RBP16.19■□□□□ 0.18
PTPN5-201ENST00000358540 FUBP3Q96I24 572 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN5-201ENST00000358540 CLIC5Q9NZA1 410 aa16.19■□□□□ 0.18
PTPN5-201ENST00000358540 TBKBP1A7MCY6 615 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 ANXA9O76027 345 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 PENKP01210 267 aaPredicted RBP16.18■□□□□ 0.18
PTPN5-201ENST00000358540 IL1BP01584 269 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 RALBP11234 206 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 ANPEPP15144 967 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 DSC2Q02487 901 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 KDSRQ06136 332 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 USP10Q14694 798 aaKnown RBP16.18■□□□□ 0.18
PTPN5-201ENST00000358540 DBN1Q16643 649 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 FUT10Q6P4F1 479 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 NAPRTQ6XQN6 538 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 SPATA24Q86W54 205 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 LZTR1Q8N653 840 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 TUBB6Q9BUF5 446 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 KIFC1Q9BW19 673 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 FRMPD3Q5JV73 1810 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 NYNRINQ9P2P1 1898 aaKnown RBP16.18■□□□□ 0.18
PTPN5-201ENST00000358540 TK2O00142 265 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 AURKAO14965 403 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 ADAM12O43184 909 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 ATP6V1G1O75348 118 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 AHSGP02765 367 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 ALDH2P05091 517 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 SERPINE1P05121 402 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 PAX3P23760 479 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 ARNTP27540 789 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 CD86P42081 329 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 MAGEA8P43361 318 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 CCR10P46092 362 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 ATN1P54259 1190 aaPredicted RBP16.18■□□□□ 0.18
PTPN5-201ENST00000358540 CCL23P55773 120 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 WNT3AP56704 352 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 PCID2Q5JVF3 399 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 CFAP52Q8N1V2 620 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 HHIPL1Q96JK4 782 aa16.18■□□□□ 0.18
PTPN5-201ENST00000358540 RPRD1AQ96P16 312 aaPredicted RBP16.18■□□□□ 0.18
PTPN5-201ENST00000358540 COL4A4P53420 1690 aaPredicted RBP16.17■□□□□ 0.18
PTPN5-201ENST00000358540 MAGEB16A2A368 324 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms