RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SLC6A11P48066 632 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 DGKGP49619 791 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 GEMIN4P57678 1058 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 STAT4Q14765 748 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 PCSK7Q16549 785 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 KRT71Q3SY84 523 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 KDELC2Q7Z4H8 507 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 YAF2Q8IY57 180 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 XPO6Q96QU8 1125 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 CCDC77Q9BR77 488 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 TRIM56Q9BRZ2 755 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 UBE2ZQ9H832 354 aaPredicted RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 SYBUQ9NX95 663 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 HS3ST2Q9Y278 367 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 ANHXE9PGG2 379 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 SPAG6O75602 509 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 SRCP12931 536 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 SSTR1P30872 391 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 PHBP35232 272 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 CHRNA4P43681 627 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 SCNN1BP51168 640 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 RHOAP61586 193 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 SLC20A2Q08357 652 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 HTR4Q13639 388 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 RUNX3Q13761 415 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 ATXN7L2Q5T6C5 722 aaPredicted RBP18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 MBLAC2Q68D91 279 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 CAPN12Q6ZSI9 719 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 LINC00523Q86TU6 105 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 AHI1Q8N157 1196 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 TTC17Q96AE7 1141 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 PGM2Q96G03 612 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 ATP6V1G3Q96LB4 118 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 NUDCD1Q96RS6 583 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 EBNA1BP2Q99848 306 aaKnown RBP18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 HAUS2Q9NVX0 235 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 GTSE1Q9NYZ3 720 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 SLC27A6Q9Y2P4 619 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 NUMBLQ9Y6R0 609 aa18.37■□□□□ 0.53
SMARCD3-202ENST00000356800 TICRRQ7Z2Z1 1910 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 SDR42E2A6NKP2 422 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 HMGB1P1B2RPK0 211 aaPredicted RBP18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 ARNTLO00327 626 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 RASGRF2O14827 1237 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 INSIG1O15503 277 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 IVLP07476 585 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 TPH1P17752 444 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 GDI1P31150 447 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 NSUN2Q08J23 767 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 DGKKQ5KSL6 1271 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 CERCAMQ5T4B2 595 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 AGBL2Q5U5Z8 902 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 NAIF1Q69YI7 327 aaPredicted RBP18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 C3orf62Q6ZUJ4 267 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 MTSS1LQ765P7 747 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 PALM2Q8IXS6 379 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 DNAAF3Q8N9W5 541 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 TTC8Q8TAM2 541 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 CHFRQ96EP1 664 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 GUCD1Q96NT3 240 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 FSD1LQ9BXM9 530 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 VPS37BQ9H9H4 285 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 SCUBE2Q9NQ36 999 aa18.36■□□□□ 0.53
SMARCD3-202ENST00000356800 LOC285095A0A1B0GVY8 99 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 MBTPS2O43462 519 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 CPP00450 1065 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 SERPINF2P08697 491 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 ECT2LQ008S8 904 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 CDH17Q12864 832 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 SMAD4Q13485 552 aaKnown RBP18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 SLC14A2Q15849 920 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 CPA6Q8N4T0 437 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 SH2D3CQ8N5H7 860 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 SORCS1Q8WY21 1168 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 CFAP36Q96G28 342 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 TRMT61BQ9BVS5 477 aaKnown RBP18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 TM6SF2Q9BZW4 377 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 PPCSQ9HAB8 311 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 ARNT2Q9HBZ2 717 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 ZC3H7BQ9UGR2 993 aaKnown RBP18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 SLCO3A1Q9UIG8 710 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 MAD1L1Q9Y6D9 718 aa18.35■□□□□ 0.53
SMARCD3-202ENST00000356800 AP3B1O00203 1094 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 GSTA2P09210 222 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 ATXN1LP0C7T5 689 aaKnown RBP18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 GJA4P35212 333 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 OPRD1P41143 372 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 NPY2RP49146 381 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 SULT2A1Q06520 285 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 NCEH1Q6PIU2 408 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 PHTF2Q8N3S3 785 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 EPS8L3Q8TE67 593 aaKnown RBP18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 STAMBPL1Q96FJ0 436 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 FEM1CQ96JP0 617 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 MRGPRX3Q96LB0 322 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 TRIB3Q96RU7 358 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 TNKS2Q9H2K2 1166 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 FETUBQ9UGM5 382 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 SLC25A13Q9UJS0 675 aa18.34■□□□□ 0.53
SMARCD3-202ENST00000356800 ERVW-1Q9UQF0 538 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms