RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TRIP11Q15643 1979 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TMEM191CA6NGB0 347 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 SIGLEC16A6NMB1 481 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TMCO5BA8MYB1 307 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 M0QZQ0 153 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 KCNK3O14649 394 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ATP8B1O43520 1251 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 SEMA7AO75326 666 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ERLIN1O75477 346 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 C1QL1O75973 258 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 FTCDO95954 541 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 PRB1P04280 392 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 INHBBP09529 407 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 OR4Q2P0C623 313 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ODC1P11926 461 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 CD19P15391 556 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 H2AFXP16104 143 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-201ENST00000355766 DPP6P42658 865 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 GPD2P43304 727 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 RWDD2BP57060 319 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 BST2Q10589 180 aaKnown RBP7.19□□□□□ -1.26
VPS13A-201ENST00000355766 MAP9Q49MG5 647 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 NAIF1Q69YI7 327 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TRIM68Q6AZZ1 485 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ANO7Q6IWH7 933 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 FBXL19Q6PCT2 694 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 CCNI2Q6ZMN8 369 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-201ENST00000355766 RNF111Q6ZNA4 994 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 MMS22LQ6ZRQ5 1243 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TMEM110Q86TL2 294 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ERICH1Q86X53 443 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 SYT12Q8IV01 421 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 RHOT1Q8IXI2 618 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 KATNAL2Q8IYT4 538 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 HDDC3Q8N4P3 179 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ANKRD52Q8NB46 1076 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 MDGA1Q8NFP4 955 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 MDM1Q8TC05 714 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ADAMTS14Q8WXS8 1223 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TFAP2BQ92481 460 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 EXOC4Q96A65 974 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 C18orf25Q96B23 403 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-201ENST00000355766 C18orf8Q96DM3 657 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 PGLYRP2Q96PD5 576 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 GCNAQ96QF7 691 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 HNRNPABQ99729 332 aaKnown RBP7.19□□□□□ -1.26
VPS13A-201ENST00000355766 P2RY13Q9BPV8 354 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 C11orf70Q9BRQ4 267 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TRIM62Q9BVG3 475 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 SGPP1Q9BX95 441 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 HDAC8Q9BY41 377 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 UBXN6Q9BZV1 441 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 SNX25Q9H3E2 840 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 EBF3Q9H4W6 596 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TASP1Q9H6P5 420 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 KIF9Q9HAQ2 790 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 PNPLA8Q9NP80 782 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ACP6Q9NPH0 428 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 GKN1Q9NS71 199 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 HOMER3Q9NSC5 361 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ASNSD1Q9NWL6 643 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ANAPC7Q9UJX3 599 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 EFR3BQ9Y2G0 817 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 ASB3Q9Y575 518 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TENM4Q6N022 2769 aa7.19□□□□□ -1.26
VPS13A-201ENST00000355766 TEX51A0A1B0GUA7 166 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 MTMR11A4FU01 709 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 A8MXQ7 604 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 ZNF487B1APH4 448 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 M0QYV0 167 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 SPOPO43791 374 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 OPHN1O60890 802 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 ZNF189O75820 626 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-201ENST00000355766 KRT7P08729 469 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 PLA2G2AP14555 144 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 ARSAP15289 507 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 COMTP21964 271 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 RPL10P27635 214 aaKnown RBP7.18□□□□□ -1.26
VPS13A-201ENST00000355766 CDC25CP30307 473 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 HOXD12P35452 270 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 PCK1P35558 622 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 GNL1P36915 607 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-201ENST00000355766 CETN2P41208 172 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 P2RY2P41231 377 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 PTGER3P43115 390 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 ALDH1A3P47895 512 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 PEX5P50542 639 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 ATXN3P54252 364 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-201ENST00000355766 YWHAHQ04917 246 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-201ENST00000355766 PTPN20Q4JDL3 420 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 SEL1L2Q5TEA6 688 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 LYSMD4Q5XG99 296 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 LPCAT2Q7L5N7 544 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 SLC26A9Q7LBE3 791 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 ITIH5Q86UX2 942 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 SCML4Q8N228 414 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 TTC9BQ8N6N2 239 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 COG1Q8WTW3 980 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 CPA5Q8WXQ8 436 aa7.18□□□□□ -1.26
VPS13A-201ENST00000355766 KCTD13Q8WZ19 329 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms