RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SIAH1Q8IUQ4 282 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 NAT8LQ8N9F0 302 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 RP9Q8TA86 221 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 WNT8BQ93098 351 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 PPP1R10Q96QC0 940 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 TCF25Q9BQ70 676 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 WDR55Q9H6Y2 383 aaPredicted RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 MID1IP1Q9NPA3 183 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 C6orf203Q9P0P8 240 aaPredicted RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 ZNF180Q9UJW8 692 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 PSMD12O00232 456 aaPredicted RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 CILPO75339 1184 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 NOS2P35228 1153 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 POLR2LP62875 67 aaKnown RBP12.45□□□□□ -0.42
COLCA1-201ENST00000355430 RALGPS1Q5JS13 557 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 SLC39A4Q6P5W5 647 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 LZTR1Q8N653 840 aa12.45□□□□□ -0.42
COLCA1-201ENST00000355430 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 CAPN8A6NHC0 703 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 CRTAMO95727 393 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 LTFP02788 710 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 MPSTP25325 297 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 ZNF135P52742 658 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 THOP1P52888 689 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 MAPK10P53779 464 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 NUP107P57740 925 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 PSME3P61289 254 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 NEDD8Q15843 81 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 HIST2H2ACQ16777 129 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SAMD4BQ5PRF9 694 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 HIST2H2AA3Q6FI13 130 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 DACH2Q96NX9 599 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 RTKNQ9BST9 563 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 UNC93B1Q9H1C4 597 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 A0A087X1B8 175 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 C15orf38-AP3S2A0A0A6YYH1 394 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 HDAC3O15379 428 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 CLOCKO15516 846 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 DHX15O43143 795 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 GLP2RO95838 553 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TPSB2P20231 275 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 CHRNB3Q05901 458 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 KLF10Q13118 480 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 GRB14Q14449 540 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TPSAB1Q15661 275 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SLC5A9Q2M3M2 681 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TRIM16LQ309B1 348 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 ARPINQ7Z6K5 226 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 DDX1Q92499 740 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 P2RY11Q96G91 374 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 C2orf49Q9BVC5 232 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 NDUFAF1Q9Y375 327 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SMIM31A0A1B0GVY4 71 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 BCLAF3A2AJT9 711 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 KPNA3O00505 521 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 B4GALT4O60513 344 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 ATP6V1B2P21281 511 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 PRKD1Q15139 912 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TSPAN14Q8NG11 270 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SLC35B2Q8TB61 432 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 KCTD15Q96SI1 283 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 NTPCRQ9BSD7 190 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SLC25A23Q9BV35 468 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 COPG2Q9UBF2 871 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SPACA6W5XKT8 324 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 IL1R2P27930 398 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 DAB2P98082 770 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 OTUD3Q5T2D3 398 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 ACBD5Q5T8D3 534 aaPredicted RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 FBXL19Q6PCT2 694 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 SERPINA13PQ6UXR4 307 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 RBBP8Q99708 897 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TXLNGYQ9BZA5 131 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 DNAJC28Q9NX36 388 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 UTP6Q9NYH9 597 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 FETUBQ9UGM5 382 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TRIM38O00635 465 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 MAN1A2O60476 641 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 FKBP9O95302 570 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 FCGR1AP12314 374 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 NELFEP18615 380 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 GABRR2P28476 465 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TMED10P49755 219 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 MSS51Q4VC12 460 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 LIPMQ5VYY2 423 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 FKBP9P1Q75LS8 142 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TFAP2DQ7Z6R9 452 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 PQLC1Q8N2U9 271 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 TOP6BLQ8N6T0 577 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 AHCYL2Q96HN2 611 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 NPAS2Q99743 824 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 EIF2AQ9BY44 585 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 PAIP1Q9H074 479 aaKnown RBP12.44□□□□□ -0.42
COLCA1-201ENST00000355430 RGS18Q9NS28 235 aa12.44□□□□□ -0.42
COLCA1-201ENST00000355430 IFRD1O00458 451 aaPredicted RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 CCND3P30281 292 aaPredicted RBP12.43□□□□□ -0.42
COLCA1-201ENST00000355430 TUBP50607 506 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms