RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 MGARPQ8TDB4 240 aa17.41■□□□□ 0.38
VPS13B-201ENST00000355155 APOL2Q9BQE5 337 aa17.41■□□□□ 0.38
VPS13B-201ENST00000355155 PLCD4Q9BRC7 762 aa17.41■□□□□ 0.38
VPS13B-201ENST00000355155 FAM167BQ9BTA0 163 aa17.41■□□□□ 0.38
VPS13B-201ENST00000355155 ZDHHC7Q9NXF8 308 aa17.41■□□□□ 0.38
VPS13B-201ENST00000355155 SLC17A7Q9P2U7 560 aa17.41■□□□□ 0.38
VPS13B-201ENST00000355155 DCDC2Q9UHG0 476 aa17.41■□□□□ 0.38
VPS13B-201ENST00000355155 CLASP2O75122 1294 aaKnown RBP17.4■□□□□ 0.38
VPS13B-201ENST00000355155 GLRA3O75311 464 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 PMPCBO75439 489 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 SLC12A1Q13621 1099 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 ZNF235Q14590 738 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 MPPE1Q53F39 396 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 SIRPB2Q5JXA9 342 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 HHATQ5VTY9 493 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 CGB2Q6NT52 195 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 RHOJQ9H4E5 214 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 SIRPGQ9P1W8 387 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 KIF26AQ9ULI4 1882 aaPredicted RBP17.4■□□□□ 0.38
VPS13B-201ENST00000355155 EDF1O60869 148 aaKnown RBP17.4■□□□□ 0.38
VPS13B-201ENST00000355155 TPH1P17752 444 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 SERPINB8P50452 374 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 TRIM42Q8IWZ5 723 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 CACNA2D3Q8IZS8 1091 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 SHKBP1Q8TBC3 707 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 ZNF75CPQ92670 426 aaPredicted RBP17.4■□□□□ 0.38
VPS13B-201ENST00000355155 CYP2S1Q96SQ9 504 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 SEMA3CQ99985 751 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 FAM107BQ9H098 131 aa17.4■□□□□ 0.38
VPS13B-201ENST00000355155 ZNF106Q9H2Y7 1883 aaKnown RBP17.4■□□□□ 0.38
VPS13B-201ENST00000355155 SLC7A4O43246 635 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 NDST3O95803 873 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 PTPN2P17706 415 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 CYP4F8P98187 520 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 CDK18Q07002 472 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 RNF219Q5W0B1 726 aaPredicted RBP17.39■□□□□ 0.38
VPS13B-201ENST00000355155 CDHR3Q6ZTQ4 885 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 GPR150Q8NGU9 434 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 FIBINQ8TAL6 211 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 ZNF398Q8TD17 642 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 SLC46A2Q9BY10 475 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 C20orf96Q9NUD7 363 aaPredicted RBP17.39■□□□□ 0.38
VPS13B-201ENST00000355155 LHX3Q9UBR4 397 aa17.39■□□□□ 0.38
VPS13B-201ENST00000355155 TYW5A2RUC4 315 aaKnown RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 NRG2O14511 850 aaPredicted RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 INSIG1O15503 277 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 TBL1XO60907 577 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 SERPINF2P08697 491 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 ERVK-21P61565 698 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 CES3Q6UWW8 571 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 ZC3HC1Q86WB0 502 aaKnown RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 CCDC197Q8NCU1 140 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 GDAP1Q8TB36 358 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 TMA16Q96EY4 203 aaKnown RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 ZNF778Q96MU6 729 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 FEM1AQ9BSK4 669 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 HTATIP2Q9BUP3 242 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 TASP1Q9H6P5 420 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 TRPC7Q9HCX4 862 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 DPP7Q9UHL4 492 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 ANKRD6Q9Y2G4 727 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 TGDSO95455 350 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 GSRP00390 522 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 IRF1P10914 325 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 MAXP61244 160 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 BMPR2Q13873 1038 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 PDE1CQ14123 709 aaPredicted RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 IL31Q6EBC2 164 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 STRA8Q7Z7C7 330 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 CINPQ9BW66 212 aaPredicted RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 MFSD1Q9H3U5 465 aa17.39■□□□□ 0.37
VPS13B-201ENST00000355155 ALG13Q9NP73 1137 aaKnown RBP17.39■□□□□ 0.37
VPS13B-201ENST00000355155 LEFTY2O00292 366 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 LDB2O43679 373 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 VIMP08670 466 aaKnown RBP17.38■□□□□ 0.37
VPS13B-201ENST00000355155 SPATA31D3P0C874 917 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 USP4Q13107 963 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 MROH9Q5TGP6 573 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 ESRP1Q6NXG1 681 aaKnown RBP17.38■□□□□ 0.37
VPS13B-201ENST00000355155 NCEH1Q6PIU2 408 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 SPATA31D4Q6ZUB0 917 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 OR13J1Q8NGT2 312 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 GABPB2Q8TAK5 448 aaPredicted RBP17.38■□□□□ 0.37
VPS13B-201ENST00000355155 CALML6Q8TD86 181 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 TPP1O14773 563 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 PRKCGP05129 697 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 COL6A2P12110 1019 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 CCR2P41597 374 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 SERPINB4P48594 390 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 HSP90AA5PQ58FG0 334 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 PLPP4Q5VZY2 271 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 FSTL4Q6MZW2 842 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 DCLK2Q8N568 766 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 BRSK1Q8TDC3 778 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 ACDQ96AP0 544 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 NSMCE3Q96MG7 304 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 AGAP2Q99490 1192 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 C17orf80Q9BSJ5 609 aa17.38■□□□□ 0.37
VPS13B-201ENST00000355155 EMCNQ9ULC0 261 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms