RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 FASTKQ14296 549 aaKnown RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 GRAMD4Q6IC98 578 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 RASGEF1CQ8N431 466 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 STK32AQ8WU08 396 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 KCTD4Q8WVF5 259 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 OXNAD1Q96HP4 312 aaPredicted RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 NLNQ9BYT8 704 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 AJAP1Q9UKB5 411 aaPredicted RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 TNPO3Q9Y5L0 923 aaKnown RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 BAZ2AQ9UIF9 1905 aaKnown RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 C2CD4BA6NLJ0 364 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 FCHO1O14526 889 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 CD3EAPO15446 510 aaKnown RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 ABHD2P08910 425 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 SCTRP47872 440 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 POTEHQ6S545 545 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 CHST9Q7L1S5 443 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 C10orf53Q8N6V4 93 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 SHISA4Q96DD7 197 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 SH3GL1Q99961 368 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 FBXO5Q9UKT4 447 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 DNTTP04053 509 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 APODP05090 189 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 ITGA2BP08514 1039 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 NAGLUP54802 743 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 RAB10P61026 200 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 TTMPQ5BVD1 217 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 CEP70Q8NHQ1 597 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 RXFP1Q9HBX9 757 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 KLQ9UEF7 1012 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 EVLQ9UI08 416 aaPredicted RBP15.03■□□□□ -0
COL17A1-201ENST00000353479 SALL4Q9UJQ4 1053 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 ALS2Q96Q42 1657 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 KCNU1A8MYU2 1149 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 TSHRP16473 764 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 MAP3K10Q02779 954 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 ARHGAP17Q68EM7 881 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 CNSTQ6PJW8 725 aa15.03■□□□□ -0
COL17A1-201ENST00000353479 PTPRJQ12913 1337 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 A0A0U1RQF3 1178 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 TCRBV9S1A1TA0A576 114 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 PPEF2O14830 753 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 NFATC1O95644 943 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 ALDH6A1Q02252 535 aaKnown RBP15.02■□□□□ -0
COL17A1-201ENST00000353479 IRF8Q02556 426 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 MSLNQ13421 630 aaPredicted RBP15.02■□□□□ -0
COL17A1-201ENST00000353479 RCN1Q15293 331 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 RIPOR1Q6ZS17 1223 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 DEFB107AQ8IZN7 70 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 ASB2Q96Q27 587 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 ARHGEF4Q9NR80 690 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 EFR3BQ9Y2G0 817 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 RGS14O43566 566 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 SLC25A14O95258 325 aaPredicted RBP15.02■□□□□ -0
COL17A1-201ENST00000353479 UGT2B4P06133 528 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 HPGDP15428 266 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 FAM187BQ17R55 369 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 RHBDF2Q6PJF5 856 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 AUTS2Q8WXX7 1259 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 MAN1C1Q9NR34 630 aa15.02■□□□□ -0
COL17A1-201ENST00000353479 RPL14P50914 215 aaKnown RBP15.02□□□□□ -0.01
COL17A1-201ENST00000353479 LYPLAL1Q5VWZ2 237 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 PPP2R2DQ66LE6 453 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 TRPC4APQ8TEL6 797 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 KCTD14Q9BQ13 255 aaPredicted RBP15.02□□□□□ -0.01
COL17A1-201ENST00000353479 C11orf84Q9BUA3 381 aaPredicted RBP15.02□□□□□ -0.01
COL17A1-201ENST00000353479 ACSS3Q9H6R3 686 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 CREBZFQ9NS37 354 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 KPNA5O15131 536 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 STBD1O95210 358 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 FTH1P02794 183 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 ZNF23P17027 643 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 CYP4F8P98187 520 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 ABRQ12979 859 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 KYQ8NBH2 561 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 OR7D4Q8NG98 312 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 C2orf15Q8WU43 125 aaKnown RBP15.02□□□□□ -0.01
COL17A1-201ENST00000353479 UNC93B1Q9H1C4 597 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 SNX13Q9Y5W8 968 aa15.02□□□□□ -0.01
COL17A1-201ENST00000353479 C16orf96A6NNT2 1141 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 SERPINB3P29508 390 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 ATXN1P54253 815 aaKnown RBP15.01□□□□□ -0.01
COL17A1-201ENST00000353479 TBL3Q12788 808 aaKnown RBP15.01□□□□□ -0.01
COL17A1-201ENST00000353479 DNAJC14Q6Y2X3 702 aaPredicted RBP15.01□□□□□ -0.01
COL17A1-201ENST00000353479 POU5F2Q8N7G0 328 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 DNAJC9Q8WXX5 260 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 DUS2Q9NX74 493 aaKnown RBP15.01□□□□□ -0.01
COL17A1-201ENST00000353479 ARMCX1Q9P291 453 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 NDUFAF1Q9Y375 327 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 HBS1LQ9Y450 684 aaKnown RBP15.01□□□□□ -0.01
COL17A1-201ENST00000353479 MEI4A8MW99 385 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 ALOX15BO15296 676 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 KCNA3P22001 575 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 GJA9P57773 515 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 CRYMQ14894 314 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 PAGE2BQ5JRK9 111 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
COL17A1-201ENST00000353479 SLC39A4Q6P5W5 647 aa15.01□□□□□ -0.01
COL17A1-201ENST00000353479 PSRC1Q6PGN9 363 aaPredicted RBP15.01□□□□□ -0.01
COL17A1-201ENST00000353479 OR52K2Q8NGK3 314 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms