RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TBC1D3Q8IZP1 549 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 ZNF567Q8N184 647 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 IRGQQ8WZA9 623 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 PGM2Q96G03 612 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 MARK4Q96L34 752 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 GAS2L1Q99501 681 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 HGH1Q9BTY7 390 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 C11orf84Q9BUA3 381 aaPredicted RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 NEUROG2Q9H2A3 272 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 DUS2Q9NX74 493 aaKnown RBP13.84□□□□□ -0.19
SMC6-201ENST00000351948 CIDEBQ9UHD4 219 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 CD84Q9UIB8 345 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 INSL6Q9Y581 213 aa13.84□□□□□ -0.19
SMC6-201ENST00000351948 FFAR3O14843 346 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 GPR42O15529 346 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 SLC25A14O95258 325 aaPredicted RBP13.83□□□□□ -0.19
SMC6-201ENST00000351948 ITGA2BP08514 1039 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 CTSEP14091 401 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 STX5Q13190 355 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 PSRC1Q6PGN9 363 aaPredicted RBP13.83□□□□□ -0.19
SMC6-201ENST00000351948 LRRC49Q8IUZ0 686 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 RASGEF1CQ8N431 466 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 CASP10Q92851 521 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 TMEM209Q96SK2 561 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 LRRC4CQ9HCJ2 640 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 RAI2Q9Y5P3 530 aa13.83□□□□□ -0.19
SMC6-201ENST00000351948 MEI4A8MW99 385 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 CRYMQ14894 314 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 ATP6AP1LQ52LC2 224 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 FNBP1LQ5T0N5 605 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 STXBP5Q5T5C0 1151 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 ATXN7L2Q5T6C5 722 aaPredicted RBP13.83□□□□□ -0.2
SMC6-201ENST00000351948 SERINC5Q86VE9 423 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 PTGR2Q8N8N7 351 aaPredicted RBP13.83□□□□□ -0.2
SMC6-201ENST00000351948 STK32AQ8WU08 396 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 CPT1BQ92523 772 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 MFSD3Q96ES6 412 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 MYO19Q96H55 970 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 PPP1R10Q96QC0 940 aaKnown RBP13.83□□□□□ -0.2
SMC6-201ENST00000351948 PRDM16Q9HAZ2 1276 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 NDRG2Q9UN36 371 aaKnown RBP13.83□□□□□ -0.2
SMC6-201ENST00000351948 KCNQ1P51787 676 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 FBXW11Q9UKB1 542 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 SEC22BO75396 215 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 DDX5P17844 614 aaKnown RBP13.83□□□□□ -0.2
SMC6-201ENST00000351948 ATP6V1E1P36543 226 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 AIF1P55008 147 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 HPCAP84074 193 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 AGMOQ6ZNB7 445 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 TRPC4APQ8TEL6 797 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 FAR2Q96K12 515 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 MECRQ9BV79 373 aa13.83□□□□□ -0.2
SMC6-201ENST00000351948 C12orf65Q9H3J6 166 aaKnown RBP13.83□□□□□ -0.2
SMC6-201ENST00000351948 KRT6AP02538 564 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 KRT6BP04259 564 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 SERPINB3P29508 390 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 KRT6CP48668 564 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 PRKAA1Q13131 559 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 OR4L1Q8NH43 312 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 OPTCQ9UBM4 332 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 SNX8Q9Y5X2 465 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 MYH1P12882 1939 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 DCXO43602 365 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 L1CAMP32004 1257 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 MAPK8P45983 427 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 MAP3K10Q02779 954 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 CYLC2Q14093 348 aaPredicted RBP13.82□□□□□ -0.2
SMC6-201ENST00000351948 FBXO48Q5FWF7 155 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 ZNF366Q8N895 744 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 PRCCQ92733 491 aaPredicted RBP13.82□□□□□ -0.2
SMC6-201ENST00000351948 WRAP53Q9BUR4 548 aaKnown RBP13.82□□□□□ -0.2
SMC6-201ENST00000351948 ACAT2Q9BWD1 397 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 SMG9Q9H0W8 520 aaKnown RBP13.82□□□□□ -0.2
SMC6-201ENST00000351948 CCDC167Q9P0B6 97 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 KLQ9UEF7 1012 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 ADAMTS5Q9UNA0 930 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 STRCP1A6NGW2 1772 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 A0A1B0GVM2 712 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 TCAF2A6NFQ2 919 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 CD3EAPO15446 510 aaKnown RBP13.82□□□□□ -0.2
SMC6-201ENST00000351948 KCNE1P15382 129 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 CYP51A1Q16850 503 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 ASTE1Q2TB18 679 aaPredicted RBP13.82□□□□□ -0.2
SMC6-201ENST00000351948 AFTPHQ6ULP2 937 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 MIEF1Q9NQG6 463 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 THAP1Q9NVV9 213 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 NMRK1Q9NWW6 199 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 DTLQ9NZJ0 730 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 FZD10Q9ULW2 581 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 ENPP3O14638 875 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 LTA4HP09960 611 aaKnown RBP13.82□□□□□ -0.2
SMC6-201ENST00000351948 PLA2G4EQ3MJ16 856 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 IL27RAQ6UWB1 636 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 SLC39A8Q9C0K1 460 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 ACSS3Q9H6R3 686 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 EFCAB1Q9HAE3 211 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 ABCB8Q9NUT2 735 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
SMC6-201ENST00000351948 ABHD14A-ACY1A0A1B0GW23 586 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms