RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 IHHQ14623 411 aa20.58■□□□□ 0.89
CHRNA3-202ENST00000348639 MYLKQ15746 1914 aa20.58■□□□□ 0.89
CHRNA3-202ENST00000348639 A8MUI8 341 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 PAPSS2O95340 614 aaPredicted RBP20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 SLC35E2BP0CK96 405 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 COL6A2P12110 1019 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 C1QTNF8P60827 252 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 SLC12A1Q13621 1099 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 TSTD2Q5T7W7 516 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 TMCO4Q5TGY1 634 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 KLHDC10Q6PID8 442 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 RDH11Q8TC12 318 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 DIS3LQ8TF46 1054 aaKnown RBP20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 SREK1Q8WXA9 508 aaKnown RBP20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 TOX2Q96NM4 488 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 FAM96AQ9H5X1 160 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 CD248Q9HCU0 757 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 TMEM39AQ9NV64 488 aa20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 AFF4Q9UHB7 1163 aaKnown RBP20.58■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF840PA6NDX5 716 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 CAPN14A8MX76 684 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 H2AFYO75367 372 aaKnown RBP20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 SLC6A4P31645 630 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 ARRB2P32121 409 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 SLC8A1P32418 973 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF470Q6ECI4 717 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 NEPROQ6NW34 567 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 CNKSR3Q6P9H4 555 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 ATG14Q6ZNE5 492 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 KIAA0408Q6ZU52 694 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 LONP2Q86WA8 852 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 SLC41A1Q8IVJ1 513 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 TSNARE1Q96NA8 513 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 BTBD10Q9BSF8 475 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 ARMCX1Q9P291 453 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 UXTQ9UBK9 157 aaPredicted RBP20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 FBXO5Q9UKT4 447 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 PCDHB12Q9Y5F1 795 aa20.57■□□□□ 0.88
CHRNA3-202ENST00000348639 LOC285095A0A1B0GVY8 99 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 FAM95CA0A1B0GW59 222 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 PHGDHO43175 533 aaKnown RBP20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 SAT1P21673 171 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 ETFBP38117 255 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 CD151P48509 253 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 SLC11A2P49281 568 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 RAB10P61026 200 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 CALML6Q8TD86 181 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 RILPQ96NA2 401 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF599Q96NL3 588 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 CLSTN3Q9BQT9 956 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 EBF4Q9BQW3 602 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 POLR1EQ9GZS1 481 aaKnown RBP20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 TASP1Q9H6P5 420 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 PDFQ9HBH1 243 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 HSFX1Q9UBD0 423 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 LAMA2P24043 3122 aaKnown RBP20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 TMEM114B3SHH9 223 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 TRIM13O60858 407 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 SEC24AO95486 1093 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 SERPINA6P08185 405 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 ESRRAP11474 423 aaPredicted RBP20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 HECTD3Q5T447 861 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 RFWD3Q6PCD5 774 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 MFSD6LQ8IWD5 586 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 CFAP52Q8N1V2 620 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 TMEM151AQ8N4L1 468 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 GABPB2Q8TAK5 448 aaPredicted RBP20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 ACE2Q9BYF1 805 aaPredicted RBP20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 MAGEH1Q9H213 219 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 ACOT9Q9Y305 439 aa20.56■□□□□ 0.88
CHRNA3-202ENST00000348639 TTC24A2A3L6 582 aaPredicted RBP20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 MROH6A6NGR9 719 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 WFS1O76024 890 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 ABLIM3O94929 683 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 GJB5O95377 273 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 ALOX15P16050 662 aaPredicted RBP20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 STMN1P16949 149 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 HMGA1P17096 107 aaKnown RBP20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 CRABP2P29373 138 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 BPTFQ12830 3046 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 MIA3Q5JRA6 1907 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 SIRPB2Q5JXA9 342 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF461Q8TAF7 563 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 MIPEPQ99797 713 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 SEMA3CQ99985 751 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 PNPOQ9NVS9 261 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 OXSMQ9NWU1 459 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 CPSF2Q9P2I0 782 aaKnown RBP20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 TBX21Q9UL17 535 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 SORCS3Q9UPU3 1222 aa20.55■□□□□ 0.88
CHRNA3-202ENST00000348639 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 COCHO43405 550 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 ATXN1LP0C7T5 689 aaKnown RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 AVPR1AP37288 418 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 BTG3Q14201 252 aaPredicted RBP20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 ZNF235Q14590 738 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 TBCCQ15814 346 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 ZYG11AQ6WRX3 759 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 NAPRTQ6XQN6 538 aa20.54■□□□□ 0.88
CHRNA3-202ENST00000348639 CEP97Q8IW35 865 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms