RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 EFCAB10A6NFE3 127 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 FAM47E-STBD1D6RA91 191 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PSMD12O00232 456 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 KPNA3O00505 521 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 MSH3P20585 1137 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 YAP1P46937 504 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ETV1P50549 477 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 TBX4P57082 545 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 DPYSQ14117 519 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 TIGD2Q4W5G0 525 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CLVS2Q5SYC1 327 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 FBXW8Q8N3Y1 598 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 RNF208Q9H0X6 261 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 SEMA6AQ9H2E6 1030 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 LRRC40Q9H9A6 602 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 H2AFY2Q9P0M6 372 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 A6NHS1 94 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ERI2A8K979 691 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 KPNA6O60684 536 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 NOL4O94818 638 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CHI3L1P36222 383 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 TALDO1P37837 337 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CAPZA2P47755 286 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PRIM2P49643 509 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 DEFA5Q01523 94 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ALDH6A1Q02252 535 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 STARD3Q14849 445 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 HECTD3Q5T447 861 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PAFAH2Q99487 392 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 EBF3Q9H4W6 596 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PIF1Q9H611 641 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CYP3A43Q9HB55 503 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 KCNE2Q9Y6J6 123 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 KCNK1O00180 336 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PLD2O14939 933 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CPSF4O95639 269 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 USP17L7P0C7H9 530 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 TGFB3P10600 412 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 FGFR1P11362 822 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 MLNP12872 115 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PTPRAP18433 802 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 AMPD1P23109 780 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 OR1E1P30953 314 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 LPCAT4Q643R3 524 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 C11orf88Q6PI97 169 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CES3Q6UWW8 571 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ILDR2Q71H61 639 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 SPAG16Q8N0X2 631 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 EIF1ADQ8N9N8 165 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 SLC43A3Q8NBI5 491 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF606Q8WXB4 792 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ABHD16BQ9H3Z7 469 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 SERHLQ9NQF3 203 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 EIF3LQ9Y262 564 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 SSNA1O43805 119 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 GLRA3O75311 464 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CCR1P32246 355 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 MAPK9P45984 424 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF45Q02386 682 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PLD1Q13393 1074 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 SEL1L3Q68CR1 1132 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 MCOLN2Q8IZK6 566 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ZNF398Q8TD17 642 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 JPH3Q8WXH2 748 aaPredicted RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 TSEN34Q9BSV6 310 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 LSM8O95777 96 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 GLP2RO95838 553 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 GPC1P35052 558 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 TUBP50607 506 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 PAGE2BQ5JRK9 111 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 LDLRAP1Q5SW96 308 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ARMC8Q8IUR7 673 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 ZHX1-C8orf76Q96EF9 292 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 CDC42EP4Q9H3Q1 356 aaKnown RBP11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 BRD7Q9NPI1 651 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 INTS13Q9NVM9 706 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 NDUFAF4Q9P032 175 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 HMGXB4Q9UGU5 601 aa11.19□□□□□ -0.62
SMARCE1-202ENST00000348513 GRIN2DO15399 1336 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 COL5A2P05997 1499 aaPredicted RBP11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 CRTAMO95727 393 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 LGALS2P05162 132 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 ETV3P41162 512 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 RELAQ04206 551 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 IL18R1Q13478 541 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 CLCA4Q14CN2 919 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 CACHD1Q5VU97 1274 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 PAGE2Q7Z2X7 111 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 FIG4Q92562 907 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 PMEPA1Q969W9 287 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 MED8Q96G25 268 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 RETREG1Q9H6L5 497 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 RIPK2O43353 540 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 STAU1O95793 577 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 TOMM20Q15388 145 aa11.18□□□□□ -0.62
SMARCE1-202ENST00000348513 NADK2Q4G0N4 442 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms