RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TRMT13Q9NUP7 481 aaKnown RBP6.12□□□□□ -1.43
CLCN3-201ENST00000347613 ARHGEF38Q9NXL2 777 aa6.12□□□□□ -1.43
CLCN3-201ENST00000347613 DNAJB4Q9UDY4 337 aa6.12□□□□□ -1.43
CLCN3-201ENST00000347613 STAP1Q9ULZ2 295 aa6.12□□□□□ -1.43
CLCN3-201ENST00000347613 RPL26L1Q9UNX3 145 aaKnown RBP6.12□□□□□ -1.43
CLCN3-201ENST00000347613 PRUNE2Q8WUY3 3088 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 FBP2O00757 339 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 HNRNPCL1O60812 293 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TRIM13O60858 407 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 HSPA4LO95757 839 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 PIRTP0C851 137 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 YWHAQP27348 245 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 AXLP30530 894 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 SERPINB8P50452 374 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 CDK18Q07002 472 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 USP10Q14694 798 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 MBTPS1Q14703 1052 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TLR1Q15399 786 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 LRRC8EQ6NSJ5 796 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 C4orf22Q6V702 233 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 RANBP10Q6VN20 620 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 GK5Q6ZS86 529 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TMC7Q7Z402 723 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 DSELQ8IZU8 1212 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TRIB2Q92519 343 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 CDKL2Q92772 493 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 IGSF8Q969P0 613 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 CCDC97Q96F63 343 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 SLC9A7Q96T83 725 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 IL12RB2Q99665 862 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 FAM117AQ9C073 453 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 DRC3Q9H069 523 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 OCEL1Q9H607 264 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 LRCH1Q9Y2L9 728 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 COPG1Q9Y678 874 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 ATP6AP2A0A1C7CYW4 349 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 CARNS1A5YM72 827 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 ATP6AP2O75787 350 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 VNN2O95498 520 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 SPRP35270 261 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 HCAR3P49019 387 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 FOXA1P55317 472 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 SARNPP82979 210 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 DSC2Q02487 901 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 ASPHQ12797 758 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 GNASQ5JWF2 1037 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 BTBD8Q5XKL5 378 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 CLEC6AQ6EIG7 209 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 PKN3Q6P5Z2 889 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 ZYG11AQ6WRX3 759 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 PPP4R1Q8TF05 950 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 LINC01599Q8WXQ3 324 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 STMN2Q93045 179 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 GCNAQ96QF7 691 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 CDRT15Q96T59 188 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 ZBED2Q9BTP6 218 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TCF7L2Q9NQB0 619 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 CHST12Q9NRB3 414 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 POLR3BQ9NW08 1133 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 BFARQ9NZS9 450 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 GALPQ9UBC7 116 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TBC1D30Q9Y2I9 924 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 SLC45A1Q9Y2W3 748 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 FRMPD3Q5JV73 1810 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 KCNU1A8MYU2 1149 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 LIN7AO14910 233 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 IRAK2O43187 625 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 GPR39O43194 453 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 PBX3P40426 434 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 GATMP50440 423 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 NUDT2P50583 147 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 MRPS22P82650 360 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 LPIN1Q14693 890 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 AAK1Q2M2I8 961 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TRMT5Q32P41 509 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 PIGGQ5H8A4 983 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 INTS6LQ5JSJ4 861 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 AFMIDQ63HM1 303 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 ZNF549Q6P9A3 640 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 KDELC1Q6UW63 502 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 C17orf99Q6UX52 265 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 DHDDSQ86SQ9 333 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TRIM42Q8IWZ5 723 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 PCDH20Q8N6Y1 951 aaKnown RBP6.11□□□□□ -1.43
CLCN3-201ENST00000347613 PHF21BQ96EK2 531 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 SMARCD1Q96GM5 515 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TBL1YQ9BQ87 522 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TUBB6Q9BUF5 446 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 RRAGCQ9HB90 399 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 GLOD4Q9HC38 313 aa6.11□□□□□ -1.43
CLCN3-201ENST00000347613 TRIOO75962 3097 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 FAM95CA0A1B0GW59 222 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SDHDO14521 159 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CFLARO15519 480 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 MAP3K7O43318 606 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 LMNAP02545 664 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CDKN1CP49918 316 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SULT2A1Q06520 285 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RALGDSQ12967 914 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CSHL1Q14406 222 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms