RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 GATA5Q9BWX5 397 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 UNC93B1Q9H1C4 597 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 TLR9Q9NR96 1032 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 TAS2R1Q9NYW7 299 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 ZNFX1Q9P2E3 1918 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 SCAMP1O15126 338 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 PRPF4O43172 522 aaKnown RBP eCLIP13.45□□□□□ -0.26
CASC4-202ENST00000345795 TIMM44O43615 452 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 ATP6V1B1P15313 513 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 RAG1P15918 1043 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 AKT1P31749 480 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 ATP5C1P36542 298 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 SLC11A1P49279 550 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 CYP4F8P98187 520 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 CBX2Q14781 532 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 SNX30Q5VWJ9 437 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 RNF219Q5W0B1 726 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 RAB44Q7Z6P3 723 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 GABPB2Q8TAK5 448 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 TRPC4APQ8TEL6 797 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 IGSF8Q969P0 613 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 TEKT5Q96M29 485 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 CDRT15Q96T59 188 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 CORO1BQ9BR76 489 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 SLC39A3Q9BRY0 314 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 C1orf50Q9BV19 199 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 MLPHQ9BV36 600 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 COPG2Q9UBF2 871 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 HBS1LQ9Y450 684 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 ZFP37Q9Y6Q3 630 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 LRRC14BA6NHZ5 514 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 KCNU1A8MYU2 1149 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 PLIN3O60664 434 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 RPL9P32969 192 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 ABCE1P61221 599 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 PTRHD1Q6GMV3 140 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 FSTL5Q8N475 847 aaPredicted RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 OR4K2Q8NGD2 314 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 STK32AQ8WU08 396 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 SCG3Q8WXD2 468 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 OR52B2Q96RD2 323 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 CPNE1Q99829 537 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 CADM1Q9BY67 442 aaKnown RBP13.45□□□□□ -0.26
CASC4-202ENST00000345795 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 OSER1Q9NX31 292 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 SLC30A1Q9Y6M5 507 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 LTBP1Q14766 1721 aa13.45□□□□□ -0.26
CASC4-202ENST00000345795 NR5A2O00482 541 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 FFAR3O14843 346 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 GPR42O15529 346 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 PEX11AO75192 247 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 RAB27AP51159 221 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 TLE2Q04725 743 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 TBL3Q12788 808 aaKnown RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 SLC9B1Q4ZJI4 515 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 VRTNQ9H8Y1 702 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 STOML1Q9UBI4 398 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 PTGDR2Q9Y5Y4 395 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 BTN3A1O00481 513 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 KIF3CO14782 793 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 GLP2RO95838 553 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 CORO1AP31146 461 aaKnown RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 CD68P34810 354 aaPredicted RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 ECT2LQ008S8 904 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 RALGDSQ12967 914 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 CLLU1OSQ5K130 101 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 DDX53Q86TM3 631 aaKnown RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 LINC00523Q86TU6 105 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 MON1AQ86VX9 555 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 AFAP1L2Q8N4X5 818 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 SHKBP1Q8TBC3 707 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 FBXO44Q9H4M3 255 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 WDR6Q9NNW5 1121 aaKnown RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 CDYLQ9Y232 598 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 SH3BP1Q9Y3L3 701 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 A0A1W2PQ45 241 aaPredicted RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 A0A1W2PQY0 241 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 HACD1B0YJ81 288 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 NVLO15381 856 aaKnown RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 TBL1XO60907 577 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 ALADP13716 330 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 PTDSS1P48651 473 aaKnown RBP13.44□□□□□ -0.26
CASC4-202ENST00000345795 FAM151BQ6UXP7 276 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.44□□□□□ -0.265e-19■■■■■ 64.4
CASC4-202ENST00000345795 DNAJC9Q8WXX5 260 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 ING5Q8WYH8 240 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 TTPALQ9BTX7 342 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 PHACTR1Q9C0D0 580 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 PIDD1Q9HB75 910 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 MID1IP1Q9NPA3 183 aa13.44□□□□□ -0.26
CASC4-202ENST00000345795 SF3B1O75533 1304 aaKnown RBP eCLIP13.43□□□□□ -0.268e-6■■■■■ 107
CASC4-202ENST00000345795 ENPP3O14638 875 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 MTSS1O43312 755 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 C1RP00736 705 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 INHBEP58166 350 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 SPANXN3Q5MJ09 141 aa13.43□□□□□ -0.26
CASC4-202ENST00000345795 GBA3Q9H227 469 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms