RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 CYTH1Q15438 398 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 NFKBIBQ15653 356 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 SMTNL2Q2TAL5 461 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 ZNF284Q2VY69 593 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 MYLK3Q32MK0 819 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 TMEM259Q4ZIN3 620 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 SETMARQ53H47 684 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-202ENST00000344726 PPP6R3Q5H9R7 873 aaPredicted RBP14.65□□□□□ -0.06
HMGN3-202ENST00000344726 SEL1L3Q68CR1 1132 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 ALKBH5Q6P6C2 394 aaKnown RBP14.65□□□□□ -0.06
HMGN3-202ENST00000344726 RFX8Q6ZV50 586 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 KANSL1Q7Z3B3 1105 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 HORMAD1Q86X24 394 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 ARHGAP12Q8IWW6 846 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 NPWQ8N729 165 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 MFSD2AQ8NA29 543 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 RNF214Q8ND24 703 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 SLC39A8Q9C0K1 460 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 GDF3Q9NR23 364 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 CWC15Q9P013 229 aaKnown RBP14.65□□□□□ -0.06
HMGN3-202ENST00000344726 LHX3Q9UBR4 397 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 DMTF1Q9Y222 760 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.65□□□□□ -0.063e-6■□□□□ 10.3
HMGN3-202ENST00000344726 FADS3Q9Y5Q0 445 aa14.65□□□□□ -0.06
HMGN3-202ENST00000344726 C16orf96A6NNT2 1141 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 EIF3CLB5ME19 914 aaKnown RBP14.64□□□□□ -0.07
HMGN3-202ENST00000344726 KRIT1O00522 736 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 SLC31A1O15431 190 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 INSIG1O15503 277 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 PCDH8O95206 1070 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 UGT2B4P06133 528 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 NUDT1P36639 197 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 EIF4A3P38919 411 aaKnown RBP14.64□□□□□ -0.07
HMGN3-202ENST00000344726 PAPOLAP51003 745 aaKnown RBP14.64□□□□□ -0.07
HMGN3-202ENST00000344726 NDST2P52849 883 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 DPYSQ14117 519 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 INO80DQ53TQ3 878 aaPredicted RBP14.64□□□□□ -0.07
HMGN3-202ENST00000344726 CCDC122Q5T0U0 273 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 AFMIDQ63HM1 303 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 NEK5Q6P3R8 708 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 ARHGAP36Q6ZRI8 547 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 VPS36Q86VN1 386 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 CPNE8Q86YQ8 564 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 PSTKQ8IV42 348 aaKnown RBP14.64□□□□□ -0.07
HMGN3-202ENST00000344726 TP53INP2Q8IXH6 220 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 CASKIN2Q8WXE0 1202 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 EXOC2Q96KP1 924 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 KLHL32Q96NJ5 620 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 EIF3CQ99613 913 aaKnown RBP14.64□□□□□ -0.07
HMGN3-202ENST00000344726 DNAJC7Q99615 494 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 CDC6Q99741 560 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 GGT7Q9UJ14 662 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 ANAPC7Q9UJX3 599 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 APOBEC2Q9Y235 224 aaKnown RBP14.64□□□□□ -0.07
HMGN3-202ENST00000344726 MFHAS1Q9Y4C4 1052 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 CELSR3Q9NYQ7 3312 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 CHD6Q8TD26 2715 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 KNTC1P50748 2209 aa14.64□□□□□ -0.07
HMGN3-202ENST00000344726 PRAMEF26H0Y7S4 382 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 TNFSF14O43557 240 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 DFNA5O60443 496 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 PRAMEF11O60813 436 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 POP4O95707 220 aaKnown RBP14.63□□□□□ -0.07
HMGN3-202ENST00000344726 TPM3P06753 285 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 RARAP10276 462 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 RHOAP61586 193 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 SLC25A11Q02978 314 aaKnown RBP14.63□□□□□ -0.07
HMGN3-202ENST00000344726 CCDC15Q0P6D6 951 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 ACAP1Q15027 740 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 DPYSL2Q16555 572 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 ASTE1Q2TB18 679 aaPredicted RBP14.63□□□□□ -0.07
HMGN3-202ENST00000344726 ZNF805Q5CZA5 627 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 LRRC73Q5JTD7 316 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 SPECC1LQ69YQ0 1117 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 FBXL19Q6PCT2 694 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 CCNI2Q6ZMN8 369 aaPredicted RBP14.63□□□□□ -0.07
HMGN3-202ENST00000344726 KDM7AQ6ZMT4 941 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 GCNT7Q6ZNI0 430 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 IQCHQ86VS3 1027 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 VSTM4Q8IW00 320 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 NIPA2Q8N8Q9 360 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 ZCCHC14Q8WYQ9 949 aaKnown RBP14.63□□□□□ -0.07
HMGN3-202ENST00000344726 LRIG1Q96JA1 1093 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 GDAP1L1Q96MZ0 367 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 PACSIN1Q9BY11 444 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 ZWILCHQ9H900 591 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 ETNK2Q9NVF9 386 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 UBA2Q9UBT2 640 aaPredicted RBP14.63□□□□□ -0.07
HMGN3-202ENST00000344726 METRNQ9UJH8 293 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 ITM2BQ9Y287 266 aa14.63□□□□□ -0.07
HMGN3-202ENST00000344726 TAF4O00268 1085 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 RAD51BO15315 384 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 DAPK3O43293 454 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 CBFA2T2O43439 604 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 AP1G1O43747 822 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 IGSF6O95976 241 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 RGRP47804 291 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 RXRGP48443 463 aa14.62□□□□□ -0.07
HMGN3-202ENST00000344726 HCAR3P49019 387 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms