RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 LPCAT2Q7L5N7 544 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 TADA2BQ86TJ2 420 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 SYT12Q8IV01 421 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 KIAA1958Q8N8K9 716 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ATP6V0D2Q8N8Y2 350 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 TTC16Q8NEE8 873 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 HDAC11Q96DB2 347 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 FCRL2Q96LA5 508 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 SPATA13Q96N96 652 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 STMN4Q9H169 189 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 CATSPERBQ9H7T0 1116 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 RAB6BQ9NRW1 208 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 DNAJC17Q9NVM6 304 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 XPO7Q9UIA9 1087 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 NEU3Q9UQ49 428 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 A0A087WUV0 522 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 TAF4O00268 1085 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 ALOX15BO15296 676 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 TCEA3O75764 348 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 ALDH1A2O94788 518 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 CAPNS1P04632 268 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 ATXN8OSP0DMR3 200 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 TSHRP16473 764 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 HDCP19113 662 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 EIF2DP41214 584 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 DPP6P42658 865 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 PTGER3P43115 390 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 COG7P83436 770 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 ZNF33AQ06730 810 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 PPIDQ08752 370 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 GALNT2Q10471 571 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 AP1B1Q10567 949 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 KYNUQ16719 465 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 C6orf118Q5T5N4 469 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 PDIK1LQ8N165 341 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 CCDC33Q8N5R6 958 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 LZTR1Q8N653 840 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 IL17RCQ8NAC3 791 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 RLN3Q8WXF3 142 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 PGM2Q96G03 612 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 SPACA7Q96KW9 195 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 C1orf74Q96LT6 269 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 PWWP2AQ96N64 755 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 CCDC77Q9BR77 488 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 SLC12A6Q9UHW9 1150 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 MBD1Q9UIS9 605 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 ADAM21Q9UKJ8 722 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 MYOFQ9NZM1 2061 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 DMXL2Q8TDJ6 3036 aa13.73□□□□□ -0.21
HERPUD1-202ENST00000344114 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 LEFTY2O00292 366 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 RASGRF2O14827 1237 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 IGLV3-27P01718 113 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 CYP17A1P05093 508 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 HOXD12P35452 270 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 MAPK8P45983 427 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 EFEMP1Q12805 493 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 PDIA2Q13087 525 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 SEMA5AQ13591 1074 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 STAT4Q14765 748 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 MAP7D1Q3KQU3 841 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 ANKRD20A2Q5SQ80 823 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 C10orf120Q5SQS8 335 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 ANKRD20A1Q5TYW2 823 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 ANKRD20A3Q5VUR7 823 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 SNX30Q5VWJ9 437 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 TMEFF1Q8IYR6 380 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 RIBC1Q8N443 379 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 ATP11CQ8NB49 1132 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 CCNYQ8ND76 341 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 MCUQ8NE86 351 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 CCDC110Q8TBZ0 833 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 P2RY11Q96G91 374 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 SERPINB12Q96P63 405 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 LGMNQ99538 433 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 CENPHQ9H3R5 247 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 PPCSQ9HAB8 311 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 POLMQ9NP87 494 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 EIF2B3Q9NR50 452 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 PSD3Q9NYI0 1048 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 DONSONQ9NYP3 566 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 MARCH2Q9P0N8 246 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 PILRBQ9UKJ0 227 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 NUDT5Q9UKK9 219 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 SNX10Q9Y5X0 201 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 HS3ST4Q9Y661 456 aa13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 FASNP49327 2511 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-202ENST00000344114 SPAARA0A1B0GVQ0 90 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 TCRBV7S3A2A0A539 114 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 WASH4PA8MWX3 477 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 E9PAM4 449 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 H0Y626 953 aa13.71□□□□□ -0.21
HERPUD1-202ENST00000344114 GOLGA8MH3BSY2 632 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms