RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 METTL25Q8N6Q8 603 aa24.29■■□□□ 1.48
NELFB-201ENST00000343053 PPP1R10Q96QC0 940 aaKnown RBP24.29■■□□□ 1.48
NELFB-201ENST00000343053 CCDC167Q9P0B6 97 aa24.29■■□□□ 1.48
NELFB-201ENST00000343053 SFMBT1Q9UHJ3 866 aa24.29■■□□□ 1.48
NELFB-201ENST00000343053 LZTS1Q9Y250 596 aa24.29■■□□□ 1.48
NELFB-201ENST00000343053 SDHDO14521 159 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 RNASEH2AO75792 299 aaKnown RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 RTN3O95197 1032 aaPredicted RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 CTSHP09668 335 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 HOXD8P13378 290 aaPredicted RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 PGFP49763 221 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 MYLPFQ96A32 169 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 BTBD9Q96Q07 612 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 SGIP1Q9BQI5 828 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 FSD1LQ9BXM9 530 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 EFCAB1Q9HAE3 211 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 TRPC7Q9HCX4 862 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 GMPR2Q9P2T1 348 aaKnown RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 CCL15-CCL14A0A0B4J2E2 113 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 ATP6AP2A0A1C7CYW4 349 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 TTC24A2A3L6 582 aaPredicted RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 MBLAC1A4D2B0 266 aaPredicted RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 MTSS1O43312 755 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 ATP6AP2O75787 350 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 CSRP3P50461 194 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 CCL15Q16663 113 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 PCID2Q5JVF3 399 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 IL23RQ5VWK5 629 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 CYP2R1Q6VVX0 501 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 TLK2Q86UE8 772 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 DQX1Q8TE96 717 aaKnown RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 PDCD6IPQ8WUM4 868 aaKnown RBP24.28■■□□□ 1.48
NELFB-201ENST00000343053 BRD8Q9H0E9 1235 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 HHLA1C9JL84 531 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 PEX1O43933 1283 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 CXCR3P49682 368 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 MYBPC1Q00872 1141 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 OLFML2BQ68BL8 750 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 DENND5AQ6IQ26 1287 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 RDH11Q8TC12 318 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 SLC39A3Q9BRY0 314 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 SPON1Q9HCB6 807 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 MPP6Q9NZW5 540 aa24.28■■□□□ 1.48
NELFB-201ENST00000343053 C1QTNF8P60827 252 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 PDAP1Q13442 181 aaKnown RBP24.27■■□□□ 1.48
NELFB-201ENST00000343053 SLC5A9Q2M3M2 681 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 PPHLN1Q8NEY8 458 aaKnown RBP24.27■■□□□ 1.48
NELFB-201ENST00000343053 OR9I1Q8NGQ6 314 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 DPF3Q92784 378 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 TMEM209Q96SK2 561 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 UBE2OQ9C0C9 1292 aaKnown RBP24.27■■□□□ 1.48
NELFB-201ENST00000343053 CLPTM1O96005 669 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 HLA-DQB2P05538 268 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 ARCN1P48444 511 aaKnown RBP24.27■■□□□ 1.48
NELFB-201ENST00000343053 SCNN1GP51170 649 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 SLC12A2P55011 1212 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 NADK2Q4G0N4 442 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 PITRM1Q5JRX3 1037 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 MPP4Q96JB8 637 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 ETAA1Q9NY74 926 aa24.27■■□□□ 1.48
NELFB-201ENST00000343053 DICER1Q9UPY3 1922 aaKnown RBP24.26■■□□□ 1.47
NELFB-201ENST00000343053 E7ENX8 843 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 TFAP2AP05549 437 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 EPHX2P34913 555 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 SULT2A1Q06520 285 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 ARMC3Q5W041 872 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 ARHGAP12Q8IWW6 846 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 CPSF7Q8N684 471 aaKnown RBP24.26■■□□□ 1.47
NELFB-201ENST00000343053 HMGCLL1Q8TB92 370 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 EXT2Q93063 718 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 OLFM1Q99784 485 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 SLC39A8Q9C0K1 460 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 MRPL46Q9H2W6 279 aaKnown RBP24.26■■□□□ 1.47
NELFB-201ENST00000343053 ZNF236Q9UL36 1845 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 AXLP30530 894 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 LRPAP1P30533 357 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 HCAR3P49019 387 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 NME5P56597 212 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 MAXP61244 160 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 CLEC6AQ6EIG7 209 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 LINC00523Q86TU6 105 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 MARVELD2Q8N4S9 558 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 VAT1Q99536 393 aa24.26■■□□□ 1.47
NELFB-201ENST00000343053 AIF1P55008 147 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 CYTH1Q15438 398 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 RAB41Q5JT25 222 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 GLOD4Q9HC38 313 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 TMLHEQ9NVH6 421 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 RBM22Q9NW64 420 aaKnown RBP eCLIP24.25■■□□□ 1.476e-7■■■■■ 83.9
NELFB-201ENST00000343053 NCKIPSDQ9NZQ3 722 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 VTI1BQ9UEU0 232 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 PSEN2P49810 448 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 FRG1Q14331 258 aaKnown RBP24.25■■□□□ 1.47
NELFB-201ENST00000343053 AGKQ53H12 422 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 SH3RF2Q8TEC5 729 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 NCSTNQ92542 709 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 SMARCD1Q96GM5 515 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 CCDC28BQ9BUN5 200 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 VCX3AQ9NNX9 186 aa24.25■■□□□ 1.47
NELFB-201ENST00000343053 FBXO5Q9UKT4 447 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms