RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 INSIG1O15503 277 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 MBTPS2O43462 519 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 GJB3O75712 270 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 ZMPSTE24O75844 475 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 CES1P23141 567 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 ATP5DP30049 168 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 MSH2P43246 934 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 SKOR1P84550 965 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 CBLBQ13191 982 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 SMAD4Q13485 552 aaKnown RBP17.56■□□□□ 0.4
CLDN4-201ENST00000340958 DHCR24Q15392 516 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 INO80DQ53TQ3 878 aaPredicted RBP17.56■□□□□ 0.4
CLDN4-201ENST00000340958 PITRM1Q5JRX3 1037 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 YAF2Q8IY57 180 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 ARRDC2Q8TBH0 407 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 ALG14Q96F25 216 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 ACSS3Q9H6R3 686 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 PPCSQ9HAB8 311 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 GGA2Q9UJY4 613 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 RPS6KL1Q9Y6S9 549 aa17.56■□□□□ 0.4
CLDN4-201ENST00000340958 CDH16O75309 829 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 TCEA3O75764 348 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 MMP2P08253 660 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 ADH5P11766 374 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 HLA-FP30511 346 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 POU6F1Q14863 301 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 AGBL2Q5U5Z8 902 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 KDELC1Q6UW63 502 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 KLHDC8BQ8IXV7 354 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 PAF1Q8N7H5 531 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 PPHLN1Q8NEY8 458 aaKnown RBP17.55■□□□□ 0.4
CLDN4-201ENST00000340958 RSPRY1Q96DX4 576 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 LRRC3BQ96PB8 259 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 TRIM56Q9BRZ2 755 aaKnown RBP17.55■□□□□ 0.4
CLDN4-201ENST00000340958 S1PR5Q9H228 398 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 NOD2Q9HC29 1040 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 SLC25A13Q9UJS0 675 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 NCOR1O75376 2440 aa17.55■□□□□ 0.4
CLDN4-201ENST00000340958 NFATC1O95644 943 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 PABPC1P11940 636 aaKnown RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 ADRA1AP35348 466 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 SEPT6Q14141 434 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 EFTUD2Q15029 972 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 TMED2Q15363 201 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 PUS10Q3MIT2 529 aaKnown RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 METTL3Q86U44 580 aaKnown RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 SH2D3CQ8N5H7 860 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 KIAA1958Q8N8K9 716 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 FAM76AQ8TAV0 307 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 ATP2A3Q93084 1043 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 ZNF669Q96BR6 464 aaPredicted RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 PGM2Q96G03 612 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 CTNNAL1Q9UBT7 734 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 USP15Q9Y4E8 981 aaPredicted RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 PIAS1O75925 651 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 MT-CO1P00395 513 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 HPDP32754 393 aaPredicted RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 SERPINH1P50454 418 aaKnown RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 PLK1P53350 603 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 MAGOHP61326 146 aaKnown RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 CDK18Q07002 472 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 TERF2Q15554 542 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 KBTBD12Q3ZCT8 623 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 FUT11Q495W5 492 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 ACCSLQ4AC99 568 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 PCID2Q5JVF3 399 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 SPANXN3Q5MJ09 141 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 CES3Q6UWW8 571 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 RANBP10Q6VN20 620 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 RIBC1Q8N443 379 aaPredicted RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 RYBPQ8N488 228 aaPredicted RBP17.54■□□□□ 0.4
CLDN4-201ENST00000340958 CDKL2Q92772 493 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 E2F7Q96AV8 911 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 ZFYVE19Q96K21 471 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 NUDCD1Q96RS6 583 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 EBF3Q9H4W6 596 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 OBP2AQ9NY56 170 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 MARK1Q9P0L2 795 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 SLC24A2Q9UI40 661 aa17.54■□□□□ 0.4
CLDN4-201ENST00000340958 K7ERQ8 282 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 CYP17A1P05093 508 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 INHBAP08476 426 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 CA4P22748 312 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 CHRNA4P43681 627 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 RGRP47804 291 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 SULT2A1Q06520 285 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 SLC20A2Q08357 652 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 CRYMQ14894 314 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 SLC1A5Q15758 541 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 SMAD2Q15796 467 aaKnown RBP17.53■□□□□ 0.4
CLDN4-201ENST00000340958 EML3Q32P44 896 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 RNF43Q68DV7 783 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 PPM1NQ8N819 430 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 PDCD6IPQ8WUM4 868 aaKnown RBP17.53■□□□□ 0.4
CLDN4-201ENST00000340958 RPL10LQ96L21 214 aaKnown RBP17.53■□□□□ 0.4
CLDN4-201ENST00000340958 NECAB3Q96P71 396 aaPredicted RBP17.53■□□□□ 0.4
CLDN4-201ENST00000340958 PAFAH2Q99487 392 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 SLC2A11Q9BYW1 496 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 TM6SF2Q9BZW4 377 aa17.53■□□□□ 0.4
CLDN4-201ENST00000340958 CHRAC1Q9NRG0 131 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms