RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 TRAF6Q9Y4K3 522 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 TYROBPO43914 113 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 CNOT3O75175 753 aaKnown RBP14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SEC22BO75396 215 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 MFN2O95140 757 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PRDX6P30041 224 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 CD86P42081 329 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 NAA20P61599 178 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 OGDHQ02218 1023 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 VEPH1Q14D04 833 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 DDR2Q16832 855 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SLC9B1Q4ZJI4 515 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 TTC23Q5W5X9 447 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 B3GALNT2Q8NCR0 500 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PHF12Q96QT6 1004 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 ELOVL6Q9H5J4 265 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 VTA1Q9NP79 307 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 DNAJB4Q9UDY4 337 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 MSH3P20585 1137 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 DLG2Q15700 870 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 CLEC4DQ8WXI8 215 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 CEP44Q9C0F1 390 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 TUBGCP4Q9UGJ1 667 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 INVSQ9Y283 1065 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.01
RRP1B-201ENST00000340648 GCATO75600 419 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 GRIA1P42261 906 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 ST13P50502 369 aaKnown RBP14.96□□□□□ -0.01
RRP1B-201ENST00000340648 CA9Q16790 459 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 TJAP1Q5JTD0 557 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 STX19Q8N4C7 294 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 APOL4Q9BPW4 351 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 TOPAZ1Q8N9V7 1692 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 A0A0J9YYE9 177 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 C2CD4BA6NLJ0 364 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 TRIM24O15164 1050 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 TRAF3Q13114 568 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 CCDC142Q17RM4 750 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 UTS2BQ765I0 119 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.01
RRP1B-201ENST00000340648 LEF1Q9UJU2 399 aaPredicted RBP14.96□□□□□ -0.01
RRP1B-201ENST00000340648 SPATA31A6Q5VVP1 1343 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 ITGAXP20702 1163 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 NADK2Q4G0N4 442 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 RHBDF2Q6PJF5 856 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 MILR1Q7Z6M3 343 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 CBR4Q8N4T8 237 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 CCDC185Q8N715 623 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 ACTRT2Q8TDY3 377 aa14.96□□□□□ -0.02
RRP1B-201ENST00000340648 CBX4O00257 560 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 POMCP01189 267 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 AMHP03971 560 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ARL2P36404 184 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 GNASQ5JWF2 1037 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 DDX1Q92499 740 aaKnown RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 NTPCRQ9BSD7 190 aaKnown RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF112Q9UJU3 913 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 PDZK1P1A8MUH7 402 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 C9JVG2 144 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MED26O95402 600 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 OR1E1P30953 314 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 TBX4P57082 545 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ARMCX4Q5H9R4 360 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ARMC4Q5T2S8 1044 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SLC44A2Q8IWA5 706 aaPredicted RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 AGAP2Q99490 1192 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 COQ10BQ9H8M1 238 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 USE1Q9NZ43 259 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SH3GLB1Q9Y371 365 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SLIT2O94813 1529 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 CCDC189A1A4V9 331 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 FARP2O94887 1054 aaPredicted RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MT-ND1P03886 318 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 CHRNGP07510 517 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SLC11A2P49281 568 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MTTPP55157 894 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MRPS5P82675 430 aaKnown RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SLC25A52Q3SY17 297 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ZNF410Q86VK4 478 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 CNTD1Q8N815 330 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 NIPA2Q8N8Q9 360 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 OR2T34Q8NGX1 318 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 OR2T3Q8NH03 318 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 STAG3L4Q8TBR4 150 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SLC7A6OSQ96CW6 309 aaPredicted RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SENP8Q96LD8 212 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MOSPD1Q9UJG1 213 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 IQCA1LA6NCM1 817 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 AZIN1O14977 448 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ZBTB24O43167 697 aaPredicted RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ARF4P18085 180 aaPredicted RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MAPK1P28482 360 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 MZF1P28698 734 aaPredicted RBP14.95□□□□□ -0.02
RRP1B-201ENST00000340648 CCL15Q16663 113 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 ZYG11AQ6WRX3 759 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 GPSM1Q86YR5 675 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 SPPL2AQ8TCT8 520 aa14.95□□□□□ -0.02
RRP1B-201ENST00000340648 FAXDC2Q96IV6 333 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms