RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RCOR3Q9P2K3 495 aaPredicted RBP15.63■□□□□ 0.09
VAPA-201ENST00000340541 UBA2Q9UBT2 640 aaPredicted RBP15.63■□□□□ 0.09
VAPA-201ENST00000340541 PCOLCE2Q9UKZ9 415 aa15.63■□□□□ 0.09
VAPA-201ENST00000340541 A0A1W2PPC4 97 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 TMEM110-MUSTN1A8MSY1 372 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 CAPNS1P04632 268 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 FTH1P19P0C7X4 201 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 ITGB7P26010 798 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 ARHGAP25P42331 645 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 SSR1P43307 286 aaKnown RBP15.62■□□□□ 0.09
VAPA-201ENST00000340541 SNRPD1P62314 119 aaKnown RBP15.62■□□□□ 0.09
VAPA-201ENST00000340541 DPYSL3Q14195 570 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 TEAD4Q15561 434 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 HLA-BQ31612 363 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 TMCO3Q6UWJ1 677 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 ERN2Q76MJ5 926 aaKnown RBP15.62■□□□□ 0.09
VAPA-201ENST00000340541 CCDC170Q8IYT3 715 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 LRIG1Q96JA1 1093 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 GDAP1L1Q96MZ0 367 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 ZDHHC6Q9H6R6 413 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 TM7SF3Q9NS93 570 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 KLHL11Q9NVR0 708 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 TFR2Q9UP52 801 aa15.62■□□□□ 0.09
VAPA-201ENST00000340541 DMXL2Q8TDJ6 3036 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3DA0A087WVF3 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3IA0A087WXS9 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3EA0A087X179 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3KA0A087X1G2 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3FA6NER0 549 aaPredicted RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 SOWAHDA6NJG2 315 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3LB9A6J9 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 DFFAO00273 331 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 KRIT1O00522 736 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 WNT9AO14904 365 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 FLRT2O43155 660 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 POP4O95707 220 aaKnown RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 PEX11BO96011 259 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3HP0C7X1 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 CDC25BP30305 580 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 GJC1P36383 396 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 MAGEA1P43355 309 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 CSNK1EP49674 416 aaKnown RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 HADHBP55084 474 aaKnown RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 RHOAP61586 193 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 IL10RBQ08334 325 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 KRT81Q14533 505 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3GQ6DHY5 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3CQ6IPX1 549 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 CCNI2Q6ZMN8 369 aaPredicted RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 PARS2Q7L3T8 475 aaKnown RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 TRIM69Q86WT6 500 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 TBC1D3Q8IZP1 549 aaPredicted RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 RYBPQ8N488 228 aaPredicted RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 PCDH19Q8TAB3 1148 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 FAF2Q96CS3 445 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 PPP1R16AQ96I34 528 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 EXOC2Q96KP1 924 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 SLC6A18Q96N87 628 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 PREBQ9HCU5 417 aa15.61■□□□□ 0.09
VAPA-201ENST00000340541 IPO11Q9UI26 975 aaKnown RBP15.61■□□□□ 0.09
VAPA-201ENST00000340541 TP53BP1Q12888 1972 aaPredicted RBP15.6■□□□□ 0.09
VAPA-201ENST00000340541 A0A1B0GVT2 93 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 INSIG1O15503 277 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 SPINT1O43278 529 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 DFNA5O60443 496 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 IGSF6O95976 241 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 UGT2B4P06133 528 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 KRT7P08729 469 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 ADRB3P13945 408 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 RGRP47804 291 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 GRIA4P48058 902 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 NEK3P51956 506 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 PDK2Q15119 407 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 ZNF805Q5CZA5 627 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 LAYNQ6UX15 382 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 TMEM139Q8IV31 216 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 TSEN2Q8NCE0 465 aaKnown RBP15.6■□□□□ 0.09
VAPA-201ENST00000340541 BAHD1Q8TBE0 780 aaPredicted RBP15.6■□□□□ 0.09
VAPA-201ENST00000340541 SETD7Q8WTS6 366 aaKnown RBP15.6■□□□□ 0.09
VAPA-201ENST00000340541 RAPGEF5Q92565 580 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 ZNF670Q9BS34 389 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 SP110Q9HB58 689 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 DYRK4Q9NR20 520 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 TPX2Q9ULW0 747 aaKnown RBP15.6■□□□□ 0.09
VAPA-201ENST00000340541 REXO2Q9Y3B8 237 aaKnown RBP15.6■□□□□ 0.09
VAPA-201ENST00000340541 PCDHA13Q9Y5I0 950 aa15.6■□□□□ 0.09
VAPA-201ENST00000340541 EPN1Q9Y6I3 576 aaPredicted RBP15.6■□□□□ 0.09
VAPA-201ENST00000340541 TMEM131Q92545 1883 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 SHROOM3Q8TF72 1996 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 C3orf70A6NLC5 250 aaPredicted RBP15.59■□□□□ 0.09
VAPA-201ENST00000340541 C16orf96A6NNT2 1141 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 MUSKO15146 869 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 MAFKO60675 156 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 RNGTTO60942 597 aaKnown RBP15.59■□□□□ 0.09
VAPA-201ENST00000340541 DKK1O94907 266 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 NDUFA10O95299 355 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 WNT1P04628 370 aa15.59■□□□□ 0.09
VAPA-201ENST00000340541 CYLC1P35663 651 aaPredicted RBP15.59■□□□□ 0.09
VAPA-201ENST00000340541 ABL2P42684 1182 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms