RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 DNAJC28Q9NX36 388 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 HPCAL4Q9UM19 191 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 DAAM1Q9Y4D1 1078 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 GPSM3Q9Y4H4 160 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 CHD5Q8TDI0 1954 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 NBEAQ8NFP9 2946 aa13.57□□□□□ -0.24
NUDCD3-201ENST00000338427 PKD1L2Q7Z442 2459 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 LRRC53A6NM62 1247 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 CASC3O15234 703 aaKnown RBP13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 YKT6O15498 198 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 GSRP00390 522 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 PRKCGP05129 697 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 SNRPD1P62314 119 aaKnown RBP13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 SGCGQ13326 291 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 EFHC2Q5JST6 749 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 CAVIN1Q6NZI2 390 aaKnown RBP13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 TTYH3Q9C0H2 523 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 SLC39A8Q9C0K1 460 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 TCEAL2Q9H3H9 227 aaPredicted RBP13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 MBNL1Q9NR56 388 aaKnown RBP13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 LHX3Q9UBR4 397 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 PNMA8BQ9ULN7 279 aaPredicted RBP13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 COQ6Q9Y2Z9 468 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 PCDHGA1Q9Y5H4 931 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 ADAMTS20P59510 1910 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 MYLKQ15746 1914 aa13.56□□□□□ -0.24
NUDCD3-201ENST00000338427 DDX3XO00571 662 aaKnown RBP eCLIP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 NEMP1O14524 444 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 AP1G1O43747 822 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 BUB1BO60566 1050 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 PIGNO95427 931 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 MBD3O95983 291 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 FTLP02792 175 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 PSMA2P25787 234 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 ETFBP38117 255 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 RHOAP61586 193 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 INSM1Q01101 510 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 EIF2B5Q13144 721 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 ZNF211Q13398 564 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 SERINC3Q13530 473 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 C1orf61Q13536 156 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 IQCB1Q15051 598 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 ARHGAP36Q6ZRI8 547 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 VPS36Q86VN1 386 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 NSMCE3Q96MG7 304 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 KCTD15Q96SI1 283 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 DHX35Q9H5Z1 703 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 IPO11Q9UI26 975 aaKnown RBP13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 MFHAS1Q9Y4C4 1052 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 ZFYVE26Q68DK2 2539 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 APC2O95996 2303 aa13.55□□□□□ -0.24
NUDCD3-201ENST00000338427 LY6G6EA0A0G2JKS1 128 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 TTC24A2A3L6 582 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 TMEM191CA6NGB0 347 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 A6NNZ2 444 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 WASH4PA8MWX3 477 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 AREL1O15033 823 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 TSPAN6O43657 245 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 C1SP09871 688 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 RGRP47804 291 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 PAPOLAP51003 745 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 DAB2P98082 770 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 PDE1CQ14123 709 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 NR1I3Q14994 352 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 ASIC2Q16515 512 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 PLEKHA7Q6IQ23 1121 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 KIAA1161Q6NSJ0 714 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 ZSWIM9Q86XI8 627 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 RBFAQ8N0V3 343 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 UMODL1-AS1Q8N2C9 162 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 OR4C6Q8NH72 309 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 CENPTQ96BT3 561 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 APOLD1Q96LR9 279 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 WRAP53Q9BUR4 548 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 RETREG1Q9H6L5 497 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 LRRC19Q9H756 370 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 MYO1AQ9UBC5 1043 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 U3KQA8 63 aa13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 COL5A1P20908 1838 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 ANKRD11Q6UB99 2663 aaPredicted RBP13.54□□□□□ -0.24
NUDCD3-201ENST00000338427 SPTY2D1-AS1A0A0U1RR47 76 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 SMTNL1A8MU46 457 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 K7ESM1 405 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 FPGTO14772 594 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 SCAMP1O15126 338 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 TLX3O43711 291 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 TCF4P15884 667 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 ACP1P24666 158 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 ITPKBP27987 946 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 MIPP30301 263 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 YBEYP58557 167 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 TPI1P60174 286 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 PFN3P60673 137 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 TCEA2Q15560 299 aa13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 KYAT3Q6YP21 454 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 CYP4V2Q6ZWL3 525 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-201ENST00000338427 CAMK1DQ8IU85 385 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms