RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ECSITQ9BQ95 431 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 ALG9Q9H6U8 611 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 YY1AP1Q9H869 796 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 BPIFA1Q9NP55 256 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 SEMA4BQ9NPR2 832 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-202ENST00000338368 NDUFAF1Q9Y375 327 aa6.36□□□□□ -1.39
PRKDC-202ENST00000338368 TMCC1O94876 653 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 COL6A2P12110 1019 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 IL2P60568 153 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 MARK2Q7KZI7 788 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 KYQ8NBH2 561 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 THUMPD3Q9BV44 507 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ARL8BQ9NVJ2 186 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ATP6AP2A0A1C7CYW4 349 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF487B1APH4 448 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SYN3O14994 580 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ATP6AP2O75787 350 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TAS2R39P59534 338 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PLIN5Q00G26 463 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 FUT11Q495W5 492 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PTGR2Q8N8N7 351 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 WDR55Q9H6Y2 383 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 EIF3LQ9Y262 564 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 MRASO14807 208 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 UGT1A9O60656 530 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 BEST1O76090 585 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 BAIAP3O94812 1187 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 NMBRP28336 390 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ABL2P42684 1182 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 MLLT6P55198 1093 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PITX1P78337 314 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 FOXD4Q12950 439 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 USP4Q13107 963 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 IZUMO2Q6UXV1 221 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PCDH20Q8N6Y1 951 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SMG8Q8ND04 991 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 FCRL5Q96RD9 977 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TRIM4Q9C037 500 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 RNPEPL1Q9HAU8 725 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 UGT1A7Q9HAW7 530 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 UGT1A10Q9HAW8 530 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 UGT1A8Q9HAW9 530 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CROTQ9UKG9 612 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SNX13Q9Y5W8 968 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SOCS7O14512 581 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 GSC2O15499 205 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SERPINA6P08185 405 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TACR2P21452 398 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 NME5P56597 212 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CYTH1Q15438 398 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 NXNL1Q96CM4 212 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PACSIN3Q9UKS6 424 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CHKBQ9Y259 395 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PSMD12O00232 456 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 GUCA1CO95843 209 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 FGF1P05230 155 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CORO1AP31146 461 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PBX3P40426 434 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CHRNA4P43681 627 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 GNA12Q03113 381 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 DCAKDQ8WVC6 231 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 AZIN2Q96A70 460 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SLC25A23Q9BV35 468 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 STN1Q9H668 368 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 DTNAQ9Y4J8 743 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PRR5-ARHGAP8B1AHC4 643 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ARHGAP8P85298 464 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 WASHC5Q12768 1159 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 LIPMQ5VYY2 423 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TM6SF2Q9BZW4 377 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 NMUR2Q9GZQ4 415 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 RUBCNLQ9H714 662 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 AGO3Q9H9G7 860 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 USP29Q9HBJ7 922 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 EIF2B3Q9NR50 452 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 MEI4A8MW99 385 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF623O75123 536 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PARP15Q460N3 678 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 NKAPQ8N5F7 415 aaKnown RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SLAIN1Q8ND83 568 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 PSMG2Q969U7 264 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ZNF317Q96PQ6 595 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CDH19Q9H159 772 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SLC25A51Q9H1U9 297 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 DLGAP2Q9P1A6 1054 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TEX264Q9Y6I9 313 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 CKBP12277 381 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ME2P23368 584 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SLC18A1P54219 525 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 BTKQ06187 659 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 GALNTL6Q49A17 601 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 TCHHL1Q5QJ38 904 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-202ENST00000338368 MARCH8Q5T0T0 291 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 OR4L1Q8NH43 312 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 C15orf41Q9Y2V0 281 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 SNX5Q9Y5X3 404 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 MAGEA13PA6NCF6 341 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 C2orf71A6NGG8 1288 aa6.35□□□□□ -1.39
PRKDC-202ENST00000338368 ACSL4O60488 711 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms