RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 UMPSP11172 480 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 POU1F1P28069 291 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 MIPP30301 263 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 NEPROQ6NW34 567 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 ZNF605Q86T29 641 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 CLP1Q92989 425 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 CLN6Q9NWW5 311 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 TMCC2O75069 709 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 MAFO75444 373 aaPredicted RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 PSMD4P55036 377 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 EPC2Q52LR7 807 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 ATAT1Q5SQI0 421 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 ZNF621Q6ZSS3 439 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 HDHD2Q9H0R4 259 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 CLDN11O75508 207 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 CYP7B1O75881 506 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 ALADP13716 330 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 FDPSP14324 419 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 SLC20A2Q08357 652 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 CHPFQ8IZ52 775 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 PHF21BQ96EK2 531 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 PGLYRP2Q96PD5 576 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 DUSP16Q9BY84 665 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 EFR3BQ9Y2G0 817 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 LAMB1P07942 1786 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 ZNFX1Q9P2E3 1918 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 IFNGP01579 166 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 NQO1P15559 274 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 NR1D2Q14995 579 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 FAM20CQ8IXL6 584 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 ASZ1Q8WWH4 475 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 PHPT1Q9NRX4 125 aaPredicted RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 INPP4BO15327 924 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 ABHD2P08910 425 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 MRPS22P82650 360 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 MPPE1Q53F39 396 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 EIF3MQ7L2H7 374 aaKnown RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 RD3Q7Z3Z2 195 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 GPR135Q8IZ08 494 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 NELL1Q92832 810 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 GLIS2Q9BZE0 524 aaPredicted RBP12.37□□□□□ -0.43
FN1-202ENST00000336916 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
FN1-202ENST00000336916 OR6B1O95007 311 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 EOMESO95936 686 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 ETS1P14921 441 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 KDELR1P24390 212 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 TNFRSF8P28908 595 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 CCR4P51679 360 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 LAPTM5Q13571 262 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 AP5B1Q2VPB7 878 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 SH2D3CQ8N5H7 860 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 UTP15Q8TED0 518 aaKnown RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 PTCD3Q96EY7 689 aaKnown RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 FANCFQ9NPI8 374 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 MBD2Q9UBB5 411 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 LOC100653049A0A140TA62 436 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 GTPBP1O00178 669 aaKnown RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 GNSP15586 552 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 SQLEQ14534 574 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 TBCELQ5QJ74 424 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 USP49Q70CQ1 688 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 SLC24A5Q71RS6 500 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 TRIM10Q9UDY6 481 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 GSAPA4D1B5 854 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 ME2P23368 584 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 TOB1P50616 345 aaPredicted RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 WASHC2DQ5SRD0 308 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 N4BP2L1Q5TBK1 243 aaPredicted RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 FAM180AQ6UWF9 173 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 CERS6Q6ZMG9 384 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 FAM71AQ8IYT1 594 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 LHX5Q9H2C1 402 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 HIPK3Q9H422 1215 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 BCL9LQ86UU0 1499 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 FAM86B1E9PN63 330 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 DLGAP3O95886 979 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 FAM86B2P0C5J1 330 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 HSMCR30P0CW71 290 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 PDX1P52945 283 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 KCNMA1Q12791 1236 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 GJB7Q6PEY0 223 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 CEP68Q76N32 757 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 IRGQQ8WZA9 623 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 SGF29Q96ES7 293 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 HMGXB4Q9UGU5 601 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 V9GYQ6 96 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 ACAT1P24752 427 aaKnown RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 DDX6P26196 483 aaKnown RBP eCLIP12.36□□□□□ -0.431e-11■■■■□ 22.1
FN1-202ENST00000336916 HOXC12P31275 282 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 MAP1SQ66K74 1059 aaPredicted RBP12.36□□□□□ -0.43
FN1-202ENST00000336916 TMEM79Q9BSE2 394 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 TMEM120AQ9BXJ8 343 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 TRPS1Q9UHF7 1281 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 PCYOX1Q9UHG3 505 aa12.36□□□□□ -0.43
FN1-202ENST00000336916 C5orf60A6NFR6 353 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms