RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 PSMA3P25788 255 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 HOXA9P31269 272 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 SERPINB4P48594 390 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 ERVFC1P60507 584 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 ZXDBP98169 803 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 ILF2Q12905 390 aaKnown RBP13.64□□□□□ -0.23
LMO1-201ENST00000335790 LAMB3Q13751 1172 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 UGP2Q16851 508 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 LACTB2Q53H82 288 aaPredicted RBP13.64□□□□□ -0.23
LMO1-201ENST00000335790 HSP90AA5PQ58FG0 334 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 MPP7Q5T2T1 576 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 TSTD2Q5T7W7 516 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 TXNDC8Q6A555 127 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 SPATA21Q7Z572 469 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 STRA8Q7Z7C7 330 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 LCA5Q86VQ0 697 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 TRIM42Q8IWZ5 723 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 NDUFAF2Q8N183 169 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 ELMOD1Q8N336 334 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 ZNF398Q8TD17 642 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 ALG14Q96F25 216 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 FAM111AQ96PZ2 611 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 TRIB3Q96RU7 358 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 CYP2S1Q96SQ9 504 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 AGAP2Q99490 1192 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 GPR22Q99680 433 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 SEMA3CQ99985 751 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 PAIP2Q9BPZ3 127 aaKnown RBP13.64□□□□□ -0.23
LMO1-201ENST00000335790 PITPNM3Q9BZ71 974 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 RHOJQ9H4E5 214 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 MANSC1Q9H8J5 431 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 SIRPGQ9P1W8 387 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 UBA2Q9UBT2 640 aaPredicted RBP13.64□□□□□ -0.23
LMO1-201ENST00000335790 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
LMO1-201ENST00000335790 CPQQ9Y646 472 aa13.64□□□□□ -0.23
LMO1-201ENST00000335790 ANKRD36A6QL64 1941 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 TPP1O14773 563 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 LUC7L3O95232 432 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 CD160O95971 181 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 GLUD1P00367 558 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 RB1P06400 928 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 SERPINF2P08697 491 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 SPATA31D3P0C874 917 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 IRF1P10914 325 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 DDX6P26196 483 aaKnown RBP eCLIP13.63□□□□□ -0.23
LMO1-201ENST00000335790 BMP8BP34820 402 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 MAGEA10P43363 369 aaPredicted RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 CHRNA4P43681 627 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 SERPINB8P50452 374 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 CLCN4P51793 760 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 CORO7P57737 925 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 CDK18Q07002 472 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 ITKQ08881 620 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 NSUN2Q08J23 767 aaKnown RBP eCLIP13.63□□□□□ -0.23
LMO1-201ENST00000335790 PDE1CQ14123 709 aaPredicted RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 POU6F1Q14863 301 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 CYTH1Q15438 398 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 INO80DQ53TQ3 878 aaPredicted RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 RALGPS1Q5JS13 557 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 SIRPB2Q5JXA9 342 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 IL31Q6EBC2 164 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 FSTL4Q6MZW2 842 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 GPR153Q6NV75 609 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 ESRP1Q6NXG1 681 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 KIAA0408Q6ZU52 694 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 SPATA31D4Q6ZUB0 917 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 CLEC14AQ86T13 490 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 ZC3HC1Q86WB0 502 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 ZNF354CQ86Y25 554 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 LMNTD2Q8IXW0 634 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 HS6ST3Q8IZP7 471 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 DCLK2Q8N568 766 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 CCT6BQ92526 530 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 TCF25Q9BQ70 676 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 FAM167BQ9BTA0 163 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 IQCGQ9H095 443 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 C12orf65Q9H3J6 166 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 IARS2Q9NSE4 1012 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 PCMTD2Q9NV79 361 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 LSM7Q9UK45 103 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 PHTF1Q9UMS5 762 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 RRP15Q9Y3B9 282 aaKnown RBP13.63□□□□□ -0.23
LMO1-201ENST00000335790 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
LMO1-201ENST00000335790 UNC80Q8N2C7 3258 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 LCHNA4D1U4 455 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 CCT8L1PA6NM43 557 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 SLC7A4O43246 635 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 TLL1O43897 1013 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 TGDSO95455 350 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 NDST3O95803 873 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 GSRP00390 522 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 CTNNB1P35222 781 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 ARF5P84085 180 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 CYP4F8P98187 520 aa13.62□□□□□ -0.23
LMO1-201ENST00000335790 PDE1BQ01064 536 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms