RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 MID1O15344 667 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 PIGNO95427 931 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 DNTTP04053 509 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 CES1P23141 567 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 STIP1P31948 543 aaKnown RBP14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 SLC8A1P32418 973 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 MAPK8P45983 427 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 DMWDQ09019 674 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 NIPAL4Q0D2K0 466 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 CST6Q15828 149 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 CYP1B1Q16678 543 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 ANKRD20A2Q5SQ80 823 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 ANKRD20A1Q5TYW2 823 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 ANKRD20A3Q5VUR7 823 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 FAM46CQ5VWP2 391 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 ALG1LQ6GMV1 187 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 TTC27Q6P3X3 843 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 NCEH1Q6PIU2 408 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 GDPD4Q6W3E5 623 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 GSTA5Q7RTV2 222 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 RASSF3Q86WH2 238 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 CAMK1DQ8IU85 385 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 ARRDC2Q8TBH0 407 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 CCDC110Q8TBZ0 833 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 LRIG1Q96JA1 1093 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 NSMCE3Q96MG7 304 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 TUBGCP5Q96RT8 1024 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 CPEB1Q9BZB8 566 aaKnown RBP14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 TPSD1Q9BZJ3 242 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 ATP13A3Q9H7F0 1226 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 RSPH14Q9UHP6 348 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 CDC23Q9UJX2 597 aa14.25□□□□□ -0.13
APOBEC3B-202ENST00000335760 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 F5H423 210 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 ZNF500O60304 480 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 PHF2O75151 1096 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 ADH1BP00325 375 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 IFNB1P01574 187 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 UGT2B4P06133 528 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 ACADMP11310 421 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 TDGF1P13385 188 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 NFKB1P19838 968 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 C5AR1P21730 350 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 CD68P34810 354 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 COILP38432 576 aaPredicted RBP14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 METAP1P53582 386 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 BCL2L1Q07817 233 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 GRM3Q14832 879 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 RALGPS1Q5JS13 557 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 ITPRIPL1Q6GPH6 555 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 ATL2Q8NHH9 583 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 GANCQ8TET4 914 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 VOPP1Q96AW1 172 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 RTP4Q96DX8 246 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 SPATA13Q96N96 652 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 KLHL32Q96NJ5 620 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 OSBPL1AQ9BXW6 950 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 SLC25A51Q9H1U9 297 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 PABPC3Q9H361 631 aaKnown RBP14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 EBF1Q9UH73 591 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 FBXO4Q9UKT5 387 aa14.24□□□□□ -0.13
APOBEC3B-202ENST00000335760 AXIN1O15169 862 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 GALR2O43603 387 aaPredicted RBP14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 OPHN1O60890 802 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 GCATO75600 419 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 SERPINF2P08697 491 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 C7P10643 843 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ETS1P14921 441 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 SERPINA4P29622 427 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 HOXA6P31267 233 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 CD86P42081 329 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 FNTBP49356 437 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 NUBP1P53384 320 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 LMNB2Q03252 620 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ZBTB16Q05516 673 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ANGPT1Q15389 498 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ZNF805Q5CZA5 627 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 CCDC137Q6PK04 289 aaKnown RBP14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ARHGEF18Q6ZSZ5 1173 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 PRUNE1Q86TP1 453 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 AADATQ8N5Z0 425 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 CCDC89Q8N998 374 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 SPATA22Q8NHS9 363 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ARRDC3Q96B67 414 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 IMP4Q96G21 291 aaKnown RBP14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 PPP1R16AQ96I34 528 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ZNF641Q96N77 438 aaPredicted RBP14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 RBM15Q96T37 977 aaKnown RBP eCLIP14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 OMDQ99983 421 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 DDX47Q9H0S4 455 aaKnown RBP14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 GBA3Q9H227 469 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 SUV39H2Q9H5I1 410 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 DYRK4Q9NR20 520 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 SCML1Q9UN30 329 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
APOBEC3B-202ENST00000335760 CACNA1IQ9P0X4 2223 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 A0A1W2PP55 124 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 CCDC188H7C350 402 aa14.22□□□□□ -0.13
APOBEC3B-202ENST00000335760 PLK4O00444 970 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms