RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ZNF805Q5CZA5 627 aa15.13■□□□□ 0.01
KATNA1-201ENST00000335643 ADAT2Q7Z6V5 191 aaKnown RBP15.13■□□□□ 0.01
KATNA1-201ENST00000335643 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
KATNA1-201ENST00000335643 TSEN2Q8NCE0 465 aaKnown RBP15.13■□□□□ 0.01
KATNA1-201ENST00000335643 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
KATNA1-201ENST00000335643 CASKIN2Q8WXE0 1202 aa15.13■□□□□ 0.01
KATNA1-201ENST00000335643 GDAP1L1Q96MZ0 367 aa15.13■□□□□ 0.01
KATNA1-201ENST00000335643 TM7SF3Q9NS93 570 aa15.13■□□□□ 0.01
KATNA1-201ENST00000335643 SHROOM3Q8TF72 1996 aa15.13■□□□□ 0.01
KATNA1-201ENST00000335643 PCNX2A6NKB5 2137 aa15.13■□□□□ 0.01
KATNA1-201ENST00000335643 LRRK1Q38SD2 2015 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 TRPM6Q9BX84 2022 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 SPAARA0A1B0GVQ0 90 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 ARHGAP42A6NI28 874 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 SLC31A1O15431 190 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 CER1O95813 267 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 IGSF6O95976 241 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 PEX11BO96011 259 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 CEACAM1P13688 526 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 ARL4AP40617 200 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 SSR1P43307 286 aaKnown RBP15.12■□□□□ 0.01
KATNA1-201ENST00000335643 ZNF135P52742 658 aaPredicted RBP15.12■□□□□ 0.01
KATNA1-201ENST00000335643 CDH6P55285 790 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 SHBQ15464 509 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 NAPEPLDQ6IQ20 393 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 FBXL19Q6PCT2 694 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 GDPD4Q6W3E5 623 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 KDM7AQ6ZMT4 941 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 PRPF39Q86UA1 669 aaKnown RBP15.12■□□□□ 0.01
KATNA1-201ENST00000335643 HORMAD1Q86X24 394 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 SPATS2Q86XZ4 545 aaKnown RBP15.12■□□□□ 0.01
KATNA1-201ENST00000335643 TMEM145Q8NBT3 493 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 TFR2Q9UP52 801 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 BTBD3Q9Y2F9 522 aa15.12■□□□□ 0.01
KATNA1-201ENST00000335643 CEP295Q9C0D2 2601 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 TMEM110-MUSTN1A8MSY1 372 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 BUB1BO60566 1050 aaPredicted RBP15.11■□□□□ 0.01
KATNA1-201ENST00000335643 PCDH8O95206 1070 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 TOP3BO95985 862 aaKnown RBP15.11■□□□□ 0.01
KATNA1-201ENST00000335643 SLC10A7Q0GE19 358 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 SLC14A1Q13336 389 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 DPYSL3Q14195 570 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 ZNF423Q2M1K9 1284 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 TSR1Q2NL82 804 aaKnown RBP15.11■□□□□ 0.01
KATNA1-201ENST00000335643 IL27RAQ6UWB1 636 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 TMCO3Q6UWJ1 677 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 ZSWIM9Q86XI8 627 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 NAXDQ8IW45 347 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 LRIG1Q96JA1 1093 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 SP110Q9HB58 689 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 DONSONQ9NYP3 566 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 IPO11Q9UI26 975 aaKnown RBP15.11■□□□□ 0.01
KATNA1-201ENST00000335643 TTC24A2A3L6 582 aaPredicted RBP15.11■□□□□ 0.01
KATNA1-201ENST00000335643 RAD51BO15315 384 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 CBFA2T3O75081 653 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 PALMO75781 387 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 ZNF883P0CG24 379 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 C21orf59P57076 290 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 CLDN2P57739 230 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 NXPH1P58417 271 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 IL10RBQ08334 325 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 KRT81Q14533 505 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 MESDQ14696 234 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 SETMARQ53H47 684 aaPredicted RBP15.11■□□□□ 0.01
KATNA1-201ENST00000335643 NCBP2-AS2Q69YL0 99 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 NEK5Q6P3R8 708 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 DBX2Q6ZNG2 339 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 PCDH19Q8TAB3 1148 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 MRFAP1L1Q96HT8 127 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 OSBPL1AQ9BXW6 950 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 DMTF1Q9Y222 760 aa15.11■□□□□ 0.01
KATNA1-201ENST00000335643 CABIN1Q9Y6J0 2220 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 CHD8Q9HCK8 2581 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 TLR4O00206 839 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 AREL1O15033 823 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 AP1G1O43747 822 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 MFSD11O43934 449 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 MAFKO60675 156 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 MAP3K6O95382 1288 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 PAK4O96013 591 aaPredicted RBP15.1■□□□□ 0.01
KATNA1-201ENST00000335643 TIMP2P16035 220 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 PMLP29590 882 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 HADHQ16836 314 aaKnown RBP15.1■□□□□ 0.01
KATNA1-201ENST00000335643 GCNT7Q6ZNI0 430 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 CAMK1DQ8IU85 385 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 PGBD5Q8N414 524 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 LZTR1Q8N653 840 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 LRRN4Q8WUT4 740 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 RAPGEF5Q92565 580 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 ELF4Q99607 663 aaPredicted RBP15.1■□□□□ 0.01
KATNA1-201ENST00000335643 CPEB1Q9BZB8 566 aaKnown RBP15.1■□□□□ 0.01
KATNA1-201ENST00000335643 PCOLCE2Q9UKZ9 415 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 TPX2Q9ULW0 747 aaKnown RBP15.1■□□□□ 0.01
KATNA1-201ENST00000335643 HYOU1Q9Y4L1 999 aa15.1■□□□□ 0.01
KATNA1-201ENST00000335643 A0A1B0GTQ1 180 aa15.09■□□□□ 0.01
KATNA1-201ENST00000335643 IGLON5A6NGN9 336 aa15.09■□□□□ 0.01
KATNA1-201ENST00000335643 PRAMEF26H0Y7S4 382 aa15.09■□□□□ 0.01
KATNA1-201ENST00000335643 MTA2O94776 668 aa15.09■□□□□ 0.01
KATNA1-201ENST00000335643 MAN1A1P33908 653 aa15.09■□□□□ 0.01
KATNA1-201ENST00000335643 CCDC15Q0P6D6 951 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms