RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MLPHQ9BV36 600 aaPredicted RBP14.06□□□□□ -0.16
SF1-202ENST00000334944 ATXN3LQ9H3M9 355 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 PNPOQ9NVS9 261 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 GTF2IRD1Q9UHL9 959 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 FBXW11Q9UKB1 542 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 MT-CYBP00156 380 aaPredicted RBP14.06□□□□□ -0.16
SF1-202ENST00000334944 FAM58BPP0C7Q3 252 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 EML3Q32P44 896 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 ATG16L1Q676U5 607 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 KYAT3Q6YP21 454 aaKnown RBP14.06□□□□□ -0.16
SF1-202ENST00000334944 ADGRG6Q86SQ4 1221 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 KCTD13Q8WZ19 329 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 ZFRQ96KR1 1074 aaKnown RBP14.06□□□□□ -0.16
SF1-202ENST00000334944 ZIC5Q96T25 663 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 WWP1Q9H0M0 922 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 PLGRKTQ9HBL7 147 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 TGDSO95455 350 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 POLBP06746 335 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
SF1-202ENST00000334944 PAFAH1B3Q15102 231 aaKnown RBP14.06□□□□□ -0.16
SF1-202ENST00000334944 PCBP1Q15365 356 aaKnown RBP eCLIP14.06□□□□□ -0.169e-8■■■□□ 15.7
SF1-202ENST00000334944 PTAR1Q7Z6K3 402 aaPredicted RBP14.06□□□□□ -0.16
SF1-202ENST00000334944 DCLK2Q8N568 766 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 OR10T2Q8NGX3 314 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 CASP10Q92851 521 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 CLIP3Q96DZ5 547 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 NEURL2Q9BR09 285 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 SLC38A7Q9NVC3 462 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 TBCCD1Q9NVR7 557 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 KCNK4Q9NYG8 393 aa14.06□□□□□ -0.16
SF1-202ENST00000334944 PDCD11Q14690 1871 aaKnown RBP14.05□□□□□ -0.16
SF1-202ENST00000334944 A8MU76 341 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 HHLA1C9JL84 531 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 AP1G1O43747 822 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 NCF2P19878 526 aaPredicted RBP14.05□□□□□ -0.16
SF1-202ENST00000334944 DMPKQ09013 629 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 PDCD4Q53EL6 469 aaKnown RBP14.05□□□□□ -0.16
SF1-202ENST00000334944 C4orf22Q6V702 233 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 BHLHA9Q7RTU4 235 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 SPATA6LQ8N4H0 392 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 ZNF419Q96HQ0 510 aaPredicted RBP14.05□□□□□ -0.16
SF1-202ENST00000334944 COX4I2Q96KJ9 171 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 FERMT1Q9BQL6 677 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 KATNAL1Q9BW62 490 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 TRPC7Q9HCX4 862 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 NDFIP2Q9NV92 336 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 ALDH1A2O94788 518 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 ZBTB11O95625 1053 aaPredicted RBP14.05□□□□□ -0.16
SF1-202ENST00000334944 PRKCGP05129 697 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 AVPR1AP37288 418 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 SERPINB9P50453 376 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 NR1H2P55055 460 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 STEAP4Q687X5 459 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 BNIPLQ7Z465 357 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 CLVS1Q8IUQ0 354 aaPredicted RBP14.05□□□□□ -0.16
SF1-202ENST00000334944 PQLC1Q8N2U9 271 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 OSBPL6Q9BZF3 934 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 MAN1C1Q9NR34 630 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 SNX15Q9NRS6 342 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 VPS51Q9UID3 782 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 PADI3Q9ULW8 664 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 TRPV2Q9Y5S1 764 aa14.05□□□□□ -0.16
SF1-202ENST00000334944 PLIN3O60664 434 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 FGF3P11487 239 aaPredicted RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 CCR10P46092 362 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 PCLAFQ15004 111 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 UPP1Q16831 310 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 MBLAC2Q68D91 279 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 THOC7Q6I9Y2 204 aaKnown RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 PSTKQ8IV42 348 aaKnown RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 ERI1Q8IV48 349 aaKnown RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 GPR152Q8TDT2 470 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 C7orf26Q96N11 449 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 GPATCH1Q9BRR8 931 aaKnown RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 DNAI2Q9GZS0 605 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 NMRK2Q9NPI5 230 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 IARS2Q9NSE4 1012 aaKnown RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 SACM1LQ9NTJ5 587 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 C20orf96Q9NUD7 363 aaPredicted RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 RCOR3Q9P2K3 495 aaPredicted RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 GABRQQ9UN88 632 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 SF3B1O75533 1304 aaKnown RBP eCLIP14.04□□□□□ -0.168e-7■■■■□ 24.9
SF1-202ENST00000334944 AKR1A1P14550 325 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 NMBRP28336 390 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 GLRBP48167 497 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 SLC1A6P48664 564 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 LHX1P48742 406 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 COPAP53621 1224 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 CRHR2Q13324 411 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 OGFRL1Q5TC84 451 aaPredicted RBP14.04□□□□□ -0.16
SF1-202ENST00000334944 FSTL4Q6MZW2 842 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 TAF2Q6P1X5 1199 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 UTS2BQ765I0 119 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 TSPAN14Q8NG11 270 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 ACTRT2Q8TDY3 377 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 LRGUKQ96M69 825 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 CNGB3Q9NQW8 809 aa14.04□□□□□ -0.16
SF1-202ENST00000334944 FAM32AQ9Y421 112 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms