RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ACOX2Q99424 681 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 PTPN18Q99952 460 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 SLC39A8Q9C0K1 460 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 ZFYVE1Q9HBF4 777 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 TMPRSS4Q9NRS4 437 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 THAP1Q9NVV9 213 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 STX18Q9P2W9 335 aaKnown RBP11.33□□□□□ -0.6
POLR1B-202ENST00000333990 TDRKHQ9Y2W6 561 aaKnown RBP11.33□□□□□ -0.6
POLR1B-202ENST00000333990 ALOX15BO15296 676 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 PCNAP12004 261 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 PRIM2P49643 509 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 SEC24CP53992 1094 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 ATP6V0D1P61421 351 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 OTOP3Q7RTS5 596 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 LRRC34Q8IZ02 419 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 SCAMP5Q8TAC9 235 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 METTL6Q8TCB7 284 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 CXorf40BQ96DE9 158 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 MRPL46Q9H2W6 279 aaKnown RBP11.33□□□□□ -0.6
POLR1B-202ENST00000333990 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 CLDND1Q9NY35 253 aa11.33□□□□□ -0.6
POLR1B-202ENST00000333990 ZFP37Q9Y6Q3 630 aaPredicted RBP11.33□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3DA0A087WVF3 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3IA0A087WXS9 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3EA0A087X179 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 LOC100653049A0A140TA62 436 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 A0A1W2PRU2 124 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3LB9A6J9 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 PER2O15055 1255 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 DDX3YO15523 660 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 KRT34O76011 436 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 UGT2B4P06133 528 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3HP0C7X1 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 FSHRP23945 695 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 HNRNPH2P55795 449 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3CQ6IPX1 549 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 LRRC8BQ6P9F7 803 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 ANKS1BQ7Z6G8 1248 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MILR1Q7Z6M3 343 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TBC1D3Q8IZP1 549 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 OR4L1Q8NH43 312 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 SH3RF2Q8TEC5 729 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 QRFPRQ96P65 431 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 OSBPL2Q9H1P3 480 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 SCML2Q9UQR0 700 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 CHKBQ9Y259 395 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MYH6P13533 1939 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TCHHQ07283 1943 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MBLAC1A4D2B0 266 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 GUCY1B2O75343 617 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 VPS4BO75351 444 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 SLC25A14O95258 325 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 FKBP9O95302 570 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MAPK9P45984 424 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 DPYSL2Q16555 572 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 GALNTL6Q49A17 601 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 FKBP9P1Q75LS8 142 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 ZNF655Q8N720 491 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 STARD8Q92502 1023 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MAGEB10Q96LZ2 347 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 SHCBP1LQ9BZQ2 653 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MIEF1Q9NQG6 463 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 FZD10Q9ULW2 581 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 COG5Q9UP83 839 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 PHF24Q9UPV7 400 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 AURKCQ9UQB9 309 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 RAI2Q9Y5P3 530 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 BUD23O43709 281 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MGEA5O60502 916 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 HAPLN1P10915 354 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 CST5P28325 142 aaPredicted RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 ZNF844Q08AG5 666 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 OVGP1Q12889 678 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TRIM32Q13049 653 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 ZC3H3Q8IXZ2 948 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MREGQ8N565 214 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 CCDC185Q8N715 623 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 HDAC10Q969S8 669 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 SIX4Q9UIU6 781 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MYH7P12883 1935 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 TTC36A6NLP5 189 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 CCT8L1PA6NM43 557 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 PPEF2O14830 753 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 SNUPNO95149 360 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 SLC35G4P0C7Q5 338 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 HSPA1AP0DMV8 641 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 HSPA1BP0DMV9 641 aaKnown RBP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 CTPS1P17812 591 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 GRSF1Q12849 480 aaKnown RBP eCLIP11.32□□□□□ -0.6
POLR1B-202ENST00000333990 ATP6AP1LQ52LC2 224 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MFSD4BQ5TF39 518 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 MIPOL1Q8TD10 442 aa11.32□□□□□ -0.6
POLR1B-202ENST00000333990 POF1BQ8WVV4 589 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms