RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 ZNF189O75820 626 aaPredicted RBP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 ALDH1A2O94788 518 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 UNC5CO95185 931 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 LTFP02788 710 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 GSTA2P09210 222 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 HOXB2P14652 356 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 CCND1P24385 295 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 GCAP28676 217 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 WASP42768 502 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 OGDHQ02218 1023 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 PDIA2Q13087 525 aaKnown RBP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 MPP2Q14168 576 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 LLGL1Q15334 1064 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 TRIP4Q15650 581 aaPredicted RBP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 CSRP2Q16527 193 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 PTPN20Q4JDL3 420 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 HHATQ5VTY9 493 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 MSANTD2Q6P1R3 559 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 ASRGL1Q7L266 308 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 MAP7D3Q8IWC1 876 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 FAM217AQ8IXS0 508 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 ZBED8Q8IZ13 594 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 AGGF1Q8N302 714 aaeCLIP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 CPXM2Q8N436 756 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 ACTL9Q8TC94 416 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 HMGB4Q8WW32 186 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 IRGQQ8WZA9 623 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 ZC3H10Q96K80 434 aaKnown RBP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 TMEM237Q96Q45 408 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 VPS11Q9H270 941 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 ARRDC1-AS1Q9H2J1 176 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 DLL3Q9NYJ7 618 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 TBK1Q9UHD2 729 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 CDV3Q9UKY7 258 aaKnown RBP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 INVSQ9Y283 1065 aa11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 HBS1LQ9Y450 684 aaKnown RBP11.29□□□□□ -0.6
APOBEC3B-201ENST00000333467 IQANK1A0A1B0GTG1 560 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 TYROBPO43914 113 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 CST8O60676 142 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 IL1BP01584 269 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 CREB1P16220 341 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 BCKDHBP21953 392 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 MPLP40238 635 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 GPD2P43304 727 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 HARS2P49590 506 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 WDR4P57081 412 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 ATP11AP98196 1134 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 OTUD4Q01804 1114 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 PDK2Q15119 407 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 SEPT7Q16181 437 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 USP39Q53GS9 565 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 DENND1BQ6P3S1 775 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 XYLT1Q86Y38 959 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 CHPFQ8IZ52 775 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 GDAP1Q8TB36 358 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 HSFY1Q96LI6 401 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 MYCBPQ99417 103 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 CYTH2Q99418 400 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 ACOX2Q99424 681 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 TBCBQ99426 244 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 SYNCQ9H7C4 482 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 SAR1AQ9NR31 198 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 GEMIN8Q9NWZ8 242 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 PHTF1Q9UMS5 762 aa11.28□□□□□ -0.6
APOBEC3B-201ENST00000333467 PRR5-ARHGAP8B1AHC4 643 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 POC1B-GALNT4F8VUJ3 575 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 ENDOD1O94919 500 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 FBXO21O94952 628 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 IGLV3-27P01718 113 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 ERBB2P04626 1255 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 CYBBP04839 570 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 CISD3P0C7P0 127 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 TROVE2P10155 538 aaKnown RBP eCLIP11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 HOXB1P14653 301 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 CA4P22748 312 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 NTSR1P30989 418 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 RFC1P35251 1148 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 ZNF143P52747 638 aaPredicted RBP11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 ARHGAP8P85298 464 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 PUM1Q14671 1186 aaKnown RBP eCLIP11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 SF3A2Q15428 464 aaKnown RBP11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 GEN1Q17RS7 908 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 SLC45A4Q5BKX6 768 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 ERMP1Q7Z2K6 904 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 FITM2Q8N6M3 262 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 KCTD6Q8NC69 237 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 GIMAP7Q8NHV1 300 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 DDI1Q8WTU0 396 aa11.27□□□□□ -0.61
APOBEC3B-201ENST00000333467 RLN3Q8WXF3 142 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms