RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 PTPN1P18031 435 aaKnown RBP16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 KHDC1Q4VXA5 237 aaKnown RBP16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 PERM1Q5SV97 790 aa16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 TMEM63BQ5T3F8 832 aa16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 HELQQ8TDG4 1101 aa16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 PCDH18Q9HCL0 1135 aa16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 TMCO1Q9UM00 188 aa16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 SNCAIPQ9Y6H5 919 aa16.05■□□□□ 0.16
MCF2L2-201ENST00000328913 MYPNQ86TC9 1320 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 SLC15A5A6NIM6 579 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 NPR3P17342 541 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 BTG3Q14201 252 aaPredicted RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 STK40Q8N2I9 435 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 IL31RAQ8NI17 732 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 LHX5Q9H2C1 402 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 NID2Q14112 1375 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 ATP6AP2A0A1C7CYW4 349 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 FOXO6A8MYZ6 492 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 ATP6AP2O75787 350 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 MLYCDO95822 493 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 ERCC2P18074 760 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 JAK1P23458 1154 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 DPYSQ14117 519 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 TMEM86AQ8N2M4 240 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 MCOLN3Q8TDD5 553 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 KLRG1Q96E93 195 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 LNPEPQ9UIQ6 1025 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 PCDHB5Q9Y5E4 795 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 TTLL13PA6NNM8 815 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 H3BN98 237 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 MAFO75444 373 aaPredicted RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 C2P06681 752 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 ABCB1P08183 1280 aaPredicted RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 CCNB1P14635 433 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 HNRNPLP14866 589 aaKnown RBP eCLIP16.04■□□□□ 0.164e-8■■■■□ 25
MCF2L2-201ENST00000328913 MAGEA10P43363 369 aaPredicted RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 CCNHP51946 323 aaPredicted RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 FASTKD3Q14CZ7 662 aaKnown RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 PTPN20Q4JDL3 420 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 CDH22Q9UJ99 828 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 LOC100506127A0A0U1RQW1 187 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 C2orf71A6NGG8 1288 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 PDE9AO76083 593 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 MAPKAPK3Q16644 382 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 RGMBQ6NW40 437 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 FGD2Q7Z6J4 655 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 CLYBLQ8N0X4 340 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 STARD8Q92502 1023 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 CENPIQ92674 756 aaPredicted RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 CDK5RAP1Q96SZ6 601 aaKnown RBP16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 HDHD2Q9H0R4 259 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 VPS45Q9NRW7 570 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 TMEM216Q9P0N5 145 aa16.04■□□□□ 0.16
MCF2L2-201ENST00000328913 NRCAMQ92823 1304 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 EPN2O95208 641 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 PABPC1P11940 636 aaKnown RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 PRAMEF19Q5SWL8 479 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 STXBP5Q5T5C0 1151 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 CCDC149Q6ZUS6 474 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 BORCS5Q969J3 196 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 OMA1Q96E52 524 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 TRMOQ9BU70 441 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 WDR55Q9H6Y2 383 aaPredicted RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 TRPC4Q9UBN4 977 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 MTA2O94776 668 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 EIF2S1P05198 315 aaKnown RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 SNHG28P0DPA3 235 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ASTE1Q2TB18 679 aaPredicted RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 RNASEH2BQ5TBB1 312 aaKnown RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 UCMAQ8WVF2 138 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 S100ZQ8WXG8 99 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 C19orf60Q96EN9 201 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 SENP8Q96LD8 212 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ZFP42Q96MM3 310 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 GAD1Q99259 594 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 SMAD5Q99717 465 aaKnown RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ADAM2Q99965 735 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 CADM1Q9BY67 442 aaKnown RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 SERHL2Q9H4I8 314 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 TIMMDC1Q9NPL8 285 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 SERHLQ9NQF3 203 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 AHSPQ9NZD4 102 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 SLC12A4Q9UP95 1085 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 TCHHQ07283 1943 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ERBB2P04626 1255 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 CDKN2BP42772 138 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 IDH2P48735 452 aaKnown RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ACSM2AQ08AH3 577 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ACSM2BQ68CK6 577 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ARHGAP36Q6ZRI8 547 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 LRRN4Q8WUT4 740 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 DEPDC7Q96QD5 511 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 PANX3Q96QZ0 392 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 COQ7Q99807 217 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 RHOJQ9H4E5 214 aa16.03■□□□□ 0.16
MCF2L2-201ENST00000328913 ABCC13Q9NSE7 274 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms