RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 DGKKQ5KSL6 1271 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 FNBP1LQ5T0N5 605 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 ATXN7L2Q5T6C5 722 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 NCEH1Q6PIU2 408 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 RNF135Q8IUD6 432 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 MREGQ8N565 214 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 OR2AP1Q8NGE2 309 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 UCMAQ8WVF2 138 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 MYO19Q96H55 970 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 FSD1LQ9BXM9 530 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 TM6SF2Q9BZW4 377 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 CASS4Q9NQ75 786 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 XIRP2A4UGR9 3374 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 TBC1D3BA6NDS4 549 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 CTHP32929 405 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 GRIA1P42261 906 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 TNNT3P45378 269 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 ST8SIA6P61647 398 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SNRPD1P62314 119 aaKnown RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 PFKPQ01813 784 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 MSS51Q4VC12 460 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 NUDT18Q6ZVK8 323 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 RALGPS2Q86X27 583 aaPredicted RBP10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 PLPP6Q8IY26 295 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 FRS2Q8WU20 508 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 MSANTD3Q96H12 275 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 FEM1CQ96JP0 617 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 P2RY13Q9BPV8 354 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 TNKS2Q9H2K2 1166 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SAYSD1Q9NPB0 183 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SLC2A4RGQ9NR83 387 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SLCO3A1Q9UIG8 710 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 SLC8A2Q9UPR5 921 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 PIAS3Q9Y6X2 628 aa10.37□□□□□ -0.75
VIPAS39-201ENST00000327028 ANKRD36A6QL64 1941 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 USP12O75317 370 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 CDH17Q12864 832 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 PDIA2Q13087 525 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 OLIG2Q13516 323 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 PCSK7Q16549 785 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 BBS9Q3SYG4 887 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 SFTPA1Q8IWL2 248 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 ADHFE1Q8IWW8 467 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 OR52K1Q8NGK4 314 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 NSMCE3Q96MG7 304 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 THEGQ9P2T0 379 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 PRKAG3Q9UGI9 489 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 TTC34A8MYJ7 566 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 ALOX15BO15296 676 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 NARSO43776 548 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 AVILO75366 819 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 AGTP01019 485 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 SRFP11831 508 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 GLULP15104 373 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 CA4P22748 312 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 GALK1P51570 392 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 PMS2P54278 862 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 TDGQ13569 410 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 ACCSLQ4AC99 568 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 FNDC3BQ53EP0 1204 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 CARD16Q5EG05 197 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 SPDYCQ5MJ68 293 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 RANBP10Q6VN20 620 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 Q6ZVU0 165 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 LRRC39Q96DD0 335 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 TUBGCP5Q96RT8 1024 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 TRIB3Q96RU7 358 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 APOL2Q9BQE5 337 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 WDR83Q9BRX9 315 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 PLA2G4CQ9UP65 541 aa10.36□□□□□ -0.75
VIPAS39-201ENST00000327028 LOC285095A0A1B0GVY8 99 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 WASH3PC4AMC7 463 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 BANF1O75531 89 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 EPOP01588 193 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 MAGEA4P43358 317 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 TNFRSF4P43489 277 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 ZP2Q05996 745 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 CDK18Q07002 472 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 FASTKD3Q14CZ7 662 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 E2F5Q15329 346 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 DENND5AQ6IQ26 1287 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 TXNDC11Q6PKC3 985 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 TRMT10CQ7L0Y3 403 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 ZBED8Q8IZ13 594 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 AGGF1Q8N302 714 aaeCLIP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 DNAAF3Q8N9W5 541 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 IFT43Q96FT9 208 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 CDC42EP4Q9H3Q1 356 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 ARNT2Q9HBZ2 717 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 HEBP1Q9NRV9 189 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 THAP10Q9P2Z0 257 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 EVLQ9UI08 416 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 STARD13Q9Y3M8 1113 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 ARIH1Q9Y4X5 557 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 EYSQ5T1H1 3165 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 MYO10Q9HD67 2058 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 MYLKQ15746 1914 aa10.35□□□□□ -0.75
VIPAS39-201ENST00000327028 SOCS5O75159 536 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms