RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	BPGM	P07738	259 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	TPBGL	P0DKB5	382 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	SLC10A2	Q12908	348 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	CCDC153	Q494R4	210 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	SAPCD2	Q86UD0	394 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	TMPRSS6	Q8IU80	811 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	PCYOX1L	Q8NBM8	494 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	MIEF2	Q96C03	454 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	ADAM7	Q9H2U9	754 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	CCSER2	Q9H7U1	834 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	MRPL17	Q9NRX2	175 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	FAM53C	Q9NYF3	392 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	CIDEB	Q9UHD4	219 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	PSAT1	Q9Y617	370 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	KCNK10	P57789	538 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	PDE1C	Q14123	709 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	OR4K2	Q8NGD2	314 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	PRKD2	Q9BZL6	878 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	DCLRE1B	Q9H816	532 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	RNF186	Q9NXI6	227 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	PCDH10	Q9P2E7	1040 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	FFAR3	O14843	346 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	GPR42	O15529	346 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	LZTS3	O60299	673 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	GPR32	O75388	356 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	C1R	P00736	705 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	CHRM1	P11229	460 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	CKB	P12277	381 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	MZF1	P28698	734 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	CORO1A	P31146	461 aa	Known RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	PIK3CG	P48736	1102 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	SLC10A7	Q0GE19	358 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	IYD	Q6PHW0	289 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	C16orf89	Q6UX73	402 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	IZUMO2	Q6UXV1	221 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	MILR1	Q7Z6M3	343 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	CLNK	Q7Z7G1	428 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	DPF3	Q92784	378 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	PPP1R2P1	Q96PQ5	205 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	ZDHHC6	Q9H6R6	413 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	ACTR8	Q9H981	624 aa		11.95	□□□□□ -0.5
DDR1-223	ENST00000324771	DDX60L	Q5H9U9	1706 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	PIR	O00625	290 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	PTGES	O14684	152 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	GCAT	O75600	419 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	AP2A1	O95782	977 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	TLE2	Q04725	743 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	BCL2L1	Q07817	233 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	LRRC74A	Q0VAA2	488 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	PTPRCAP	Q14761	206 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	RIPOR1	Q6ZS17	1223 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	PGBD3	Q8N328	593 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ARFGAP1	Q8N6T3	406 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	METTL6	Q8TCB7	284 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	CNDP1	Q96KN2	507 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	EBF4	Q9BQW3	602 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	RUBCNL	Q9H714	662 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ASB8	Q9H765	288 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	CATSPERZ	Q9NTU4	200 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	WARS2	Q9UGM6	360 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ZNHIT2	Q9UHR6	403 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	CFAP99	D6REC4	459 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771		J3KR12	359 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	VAV1	P15498	845 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	IL10	P22301	178 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	VHL	P40337	213 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	MRPS22	P82650	360 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ARMC3	Q5W041	872 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	NAPRT	Q6XQN6	538 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	TMEM109	Q9BVC6	243 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	SYTL2	Q9HCH5	934 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	KCNU1	A8MYU2	1149 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	IGFBP6	P24592	240 aa	Predicted RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	IVD	P26440	423 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	RPL14	P50914	215 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	RAB10	P61026	200 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	IRF9	Q00978	393 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	STX5	Q13190	355 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	LAMB3	Q13751	1172 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	ARMC12	Q5T9G4	340 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	DPY19L2P1	Q6NXN4	242 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	UROC1	Q96N76	676 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	SEPHS2	Q99611	448 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	NFKBIZ	Q9BYH8	718 aa		11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	AGO1	Q9UL18	857 aa	Known RBP	11.94	□□□□□ -0.5
DDR1-223	ENST00000324771	C1orf232	A0A0U1RR37	186 aa		11.93	□□□□□ -0.5
DDR1-223	ENST00000324771	ZNF197	O14709	1029 aa		11.93	□□□□□ -0.5
DDR1-223	ENST00000324771	ZNF189	O75820	626 aa	Predicted RBP	11.93	□□□□□ -0.5
DDR1-223	ENST00000324771	CNTN5	O94779	1100 aa		11.93	□□□□□ -0.5
DDR1-223	ENST00000324771	TAS2R39	P59534	338 aa		11.93	□□□□□ -0.5
DDR1-223	ENST00000324771	LPIN1	Q14693	890 aa		11.93	□□□□□ -0.5
DDR1-223	ENST00000324771	BRMS1L	Q5PSV4	323 aa		11.93	□□□□□ -0.5
DDR1-223	ENST00000324771	MARCH8	Q5T0T0	291 aa		11.93	□□□□□ -0.5

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