RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ACDQ96AP0 544 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 TADA1Q96BN2 335 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 ZNF570Q96NI8 536 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 NECTIN4Q96NY8 510 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 SERPINB12Q96P63 405 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 RAB3IPQ96QF0 476 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-202ENST00000324340 MYADMQ96S97 322 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 SPON2Q9BUD6 331 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 BBS2Q9BXC9 721 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 SLC2A11Q9BYW1 496 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 SLC25A51Q9H1U9 297 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 EPB41L4BQ9H329 900 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 DUS2Q9NX74 493 aaKnown RBP12.94□□□□□ -0.34
DDX39A-202ENST00000324340 PLK2Q9NYY3 685 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 UBA2Q9UBT2 640 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-202ENST00000324340 FBXO10Q9UK96 956 aa12.94□□□□□ -0.34
DDX39A-202ENST00000324340 AAR2Q9Y312 384 aaKnown RBP12.94□□□□□ -0.34
DDX39A-202ENST00000324340 HEPACAM2A8MVW5 462 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 GOLGA8MH3BSY2 632 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 CBX4O00257 560 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 HOXC11O43248 304 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 ANXA9O76027 345 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 AGTP01019 485 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 TYRP14679 529 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 GLDCP23378 1020 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 MAGEA4P43358 317 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 FCHO2Q0JRZ9 810 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 CCDC15Q0P6D6 951 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 DHCR24Q15392 516 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 SPRED3Q2MJR0 410 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 PLEKHG6Q3KR16 790 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 MSS51Q4VC12 460 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 INO80DQ53TQ3 878 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 FNBP1LQ5T0N5 605 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 LRRC8BQ6P9F7 803 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 OTOP3Q7RTS5 596 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 KIAA0907Q7Z7F0 614 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 CCDC25Q86WR0 208 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 PGBD5Q8N414 524 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.93□□□□□ -0.344e-10■■■■□ 21.2
DDX39A-202ENST00000324340 AGAP11Q8TF27 550 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 ATXN2LQ8WWM7 1075 aaKnown RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 SUSD6Q92537 303 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 BHMTQ93088 406 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 THOC1Q96FV9 657 aaKnown RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 OXNAD1Q96HP4 312 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 PSKH2Q96QS6 385 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 TSC22D3Q99576 134 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 FAM83CQ9BQN1 747 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 CCDC28BQ9BUN5 200 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 C2orf49Q9BVC5 232 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 CDC42EP4Q9H3Q1 356 aaKnown RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 SEMA4AQ9H3S1 761 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 POMKQ9H5K3 350 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 ZFP14Q9HCL3 533 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 XAB2Q9HCS7 855 aaKnown RBP12.93□□□□□ -0.34
DDX39A-202ENST00000324340 SEPT3Q9UH03 358 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 VPS51Q9UID3 782 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 VPS28Q9UK41 221 aa12.93□□□□□ -0.34
DDX39A-202ENST00000324340 DOCK8Q8NF50 2099 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 PRRC2BQ5JSZ5 2229 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 NEDD8-MDP1E9PL57 170 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 RIPK2O43353 540 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 TTC4O95801 387 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 CYP17A1P05093 508 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 LAMP2P13473 410 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 IGFBP4P22692 258 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 HLA-FP30511 346 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 CD70P32970 193 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 GEMP55040 296 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 GEMIN4P57678 1058 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 PDIA2Q13087 525 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 MPP3Q13368 585 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 DMC1Q14565 340 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 PDGFRLQ15198 375 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 CYTH1Q15438 398 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 SLC14A2Q15849 920 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 SYCP2LQ5T4T6 812 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 TANGO2Q6ICL3 276 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 VITQ6UXI7 678 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 MFSD6LQ8IWD5 586 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 APCDD1Q8J025 514 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 BBS5Q8N3I7 341 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 ARRDC2Q8TBH0 407 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 ELSPBP1Q96BH3 223 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 LRRC39Q96DD0 335 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 ASIC4Q96FT7 647 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 GAS2L1Q99501 681 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 WDR83Q9BRX9 315 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 POLR1EQ9GZS1 481 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 LRRC40Q9H9A6 602 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 SAYSD1Q9NPB0 183 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 NT5MQ9NPB1 228 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 ARHGEF3Q9NR81 526 aa12.92□□□□□ -0.34
DDX39A-202ENST00000324340 PAPOLBQ9NRJ5 636 aaKnown RBP12.92□□□□□ -0.34
DDX39A-202ENST00000324340 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms