RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 MFN1Q8IWA4 741 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 ARHGAP18Q8N392 663 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 ZNF781Q8N8C0 355 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 DNAJC1Q96KC8 554 aaKnown RBP13.75□□□□□ -0.21
SRRM1-201ENST00000323848 STOML1Q9UBI4 398 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 CRLS1Q9UJA2 301 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 PKP3Q9Y446 797 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 DPYSL4O14531 572 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 SNAP91O60641 907 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 GJB5O95377 273 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 PBLDP30039 288 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-201ENST00000323848 CYP4F8P98187 520 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 OR4K2Q8NGD2 314 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 OXCT2Q9BYC2 517 aaPredicted RBP13.75□□□□□ -0.21
SRRM1-201ENST00000323848 MAF1Q9H063 256 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 NDE1Q9NXR1 346 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 NCKIPSDQ9NZQ3 722 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 BTRCQ9Y297 605 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 C2orf81A6NN90 581 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 ALADP13716 330 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 LRPAP1P30533 357 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 PIK3CGP48736 1102 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 USP41Q3LFD5 358 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 CYP2R1Q6VVX0 501 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 ZNF366Q8N895 744 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 GSTCDQ8NEC7 633 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 FCF1Q9Y324 198 aaKnown RBP13.75□□□□□ -0.21
SRRM1-201ENST00000323848 ZNF831Q5JPB2 1677 aa13.75□□□□□ -0.21
SRRM1-201ENST00000323848 TP73O15350 636 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 CABYRO75952 493 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 EPHB3P54753 998 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 TMEM259Q4ZIN3 620 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 AP1ARQ63HQ0 302 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 SCUBE1Q8IWY4 988 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 GBA3Q9H227 469 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 ZMYM5Q9UJ78 669 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 DNMT3LQ9UJW3 386 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 PRPF4O43172 522 aaKnown RBP eCLIP13.74□□□□□ -0.213e-6■■■□□ 16.6
SRRM1-201ENST00000323848 USP1O94782 785 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 ABCE1P61221 599 aaKnown RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 PTPRNQ16849 979 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 CLEC6AQ6EIG7 209 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 DNAJC14Q6Y2X3 702 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 TAS1R1Q7RTX1 841 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 CALML6Q8TD86 181 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 SUSD3Q96L08 255 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 TUBB6Q9BUF5 446 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 UBE2OQ9C0C9 1292 aaKnown RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 HEATR9A2RTY3 570 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 BTN3A1O00481 513 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 TPSB2P20231 275 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 CLLU1OSQ5K130 101 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 PIM3Q86V86 326 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 MID1IP1Q9NPA3 183 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 AURKAO14965 403 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 SYN1P17600 705 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 GLDCP23378 1020 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 GCAP28676 217 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 CBX2Q14781 532 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 RBM20Q5T481 1227 aaKnown RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 TMTC4Q5T4D3 741 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.74□□□□□ -0.219e-11■■■□□ 16.3
SRRM1-201ENST00000323848 TMEM173Q86WV6 379 aaPredicted RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 LZTR1Q8N653 840 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 ING5Q8WYH8 240 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 MTFMTQ96DP5 389 aaKnown RBP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 BTBD10Q9BSF8 475 aa13.74□□□□□ -0.21
SRRM1-201ENST00000323848 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRRM1-201ENST00000323848 PSMD3O43242 534 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 PLIN3O60664 434 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 SEC24DO94855 1032 aaPredicted RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 CYBBP04839 570 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 TUFMP49411 452 aaKnown RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 CDK18Q07002 472 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 ARL13AQ5H913 290 aaPredicted RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 PLPP4Q5VZY2 271 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 ANKS3Q6ZW76 656 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 LINC01465Q8N7H1 131 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 FAM156AQ8NDB6 213 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 TRPC4APQ8TEL6 797 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 COG4Q9H9E3 785 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 COPG2Q9UBF2 871 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 ARVCFO00192 962 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 NVLO15381 856 aaKnown RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 BAIAP3O94812 1187 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 PRSS56P0CW18 603 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 CALB2P22676 271 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 ELAVL2Q12926 359 aaKnown RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 LBRQ14739 615 aaKnown RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 PKN3Q6P5Z2 889 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 IGSF8Q969P0 613 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 VAT1Q99536 393 aa13.73□□□□□ -0.21
SRRM1-201ENST00000323848 TRMT6Q9UJA5 497 aaKnown RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 RTN3O95197 1032 aaPredicted RBP13.73□□□□□ -0.21
SRRM1-201ENST00000323848 CHEK2O96017 543 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms