RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 COG4Q9H9E3 785 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 HPS4Q9NQG7 708 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 DDHD2O94830 711 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 CCDC85BQ15834 202 aaPredicted RBP15.42■□□□□ 0.06
VARS2-201ENST00000321897 PAOXQ6QHF9 649 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 ESAMQ96AP7 390 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 SMARCD1Q96GM5 515 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 ABCG8Q9H221 673 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 AAR2Q9Y312 384 aaKnown RBP15.42■□□□□ 0.06
VARS2-201ENST00000321897 NRCAMQ92823 1304 aa15.42■□□□□ 0.06
VARS2-201ENST00000321897 UTRNP46939 3433 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 MEIS3P2A8K0S8 358 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 PRRG1O14668 218 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 OAS1P00973 400 aaKnown RBP15.41■□□□□ 0.06
VARS2-201ENST00000321897 CCR10P46092 362 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 IRF9Q00978 393 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 PTP4A2Q12974 167 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 SEMA5AQ13591 1074 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 CMASQ8NFW8 434 aaPredicted RBP15.41■□□□□ 0.06
VARS2-201ENST00000321897 PCED1BQ96HM7 432 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 FCRL2Q96LA5 508 aaPredicted RBP15.41■□□□□ 0.06
VARS2-201ENST00000321897 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 MRASO14807 208 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 LRIG2O94898 1065 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 CRTAMO95727 393 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 PIK3R1P27986 724 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 GSSP48637 474 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 HPCAP84074 193 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 ARHGAP17Q68EM7 881 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 XKR5Q6UX68 686 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 OFCC1Q8IZS5 231 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 OR6K2Q8NGY2 324 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 EURLQ9NYK6 297 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 TRIM17Q9Y577 477 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 DGKBQ9Y6T7 804 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 SYNDIG1LA6NDD5 238 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 H0Y626 953 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 STX7O15400 261 aaKnown RBP15.41■□□□□ 0.06
VARS2-201ENST00000321897 MTSS1O43312 755 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 TRIM16O95361 564 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 CHRNGP07510 517 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 GEMP55040 296 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 PFKFB4Q16877 469 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 AGAP9Q5VTM2 703 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 RHBDF2Q6PJF5 856 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 RNF19BQ6ZMZ0 732 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 LINC00523Q86TU6 105 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 ZNF781Q8N8C0 355 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 NAT16Q8N8M0 369 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 DCAKDQ8WVC6 231 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 HSFY1Q96LI6 401 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 BTRCQ9Y297 605 aa15.41■□□□□ 0.06
VARS2-201ENST00000321897 STRCP1A6NGW2 1772 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 CKMT2P17540 419 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 ARHGAP1Q07960 439 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 WASHC5Q12768 1159 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 RGS21Q2M5E4 152 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 DUSP28Q4G0W2 176 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 PTRHD1Q6GMV3 140 aaKnown RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 DHFR2Q86XF0 187 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 LPCAT1Q8NF37 534 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 HPS1Q92902 700 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 SEMA4BQ9NPR2 832 aaPredicted RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 PKP3Q9Y446 797 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 GPR182O15218 404 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 NMBRP28336 390 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 ENTPD1P49961 510 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 MYBPC3Q14896 1274 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 SLC25A52Q3SY17 297 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 PITRM1Q5JRX3 1037 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 UNC93AQ86WB7 457 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 SIX5Q8N196 739 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 PPTC7Q8NI37 304 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 MCRS1Q96EZ8 462 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 COLEC11Q9BWP8 271 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 DUSP16Q9BY84 665 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 OCEL1Q9H607 264 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 EML4Q9HC35 981 aaKnown RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 MID1IP1Q9NPA3 183 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 RGS18Q9NS28 235 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 PIGVQ9NUD9 493 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 FAM105AQ9NUU6 356 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 SCHIP1Q9P0W5 487 aaPredicted RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 UBDO15205 165 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 ELNP15502 786 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 TBX4P57082 545 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 FASTKQ14296 549 aaKnown RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 GRM3Q14832 879 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 ESRP1Q6NXG1 681 aaKnown RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 ZFP1Q6P2D0 407 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 FNIP1Q8TF40 1166 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 CPNE1Q99829 537 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 TM6SF2Q9BZW4 377 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 CXCL16Q9H2A7 254 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 ZFYVE28Q9HCC9 887 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 PNMA8BQ9ULN7 279 aaPredicted RBP15.4■□□□□ 0.06
VARS2-201ENST00000321897 RNF112Q9ULX5 631 aa15.4■□□□□ 0.06
VARS2-201ENST00000321897 TBX18O95935 607 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms