RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 ADGRE3Q9BY15 652 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 BRD8Q9H0E9 1235 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 TNKS2Q9H2K2 1166 aa11.12□□□□□ -0.63
TOP3A-201ENST00000321105 UBDO15205 165 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 GCATO75600 419 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 AP2A1O95782 977 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 COL9A2Q14055 689 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 SPRED3Q2MJR0 410 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 SYTL3Q4VX76 610 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 GPR158Q5T848 1215 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 SNX30Q5VWJ9 437 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 MAMDC4Q6UXC1 1216 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 PTGR2Q8N8N7 351 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF558Q96NG5 402 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF317Q96PQ6 595 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 GPR62Q9BZJ7 368 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 MRPL17Q9NRX2 175 aaKnown RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 SRRDQ9UH36 339 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 ZNHIT2Q9UHR6 403 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 KCTD3Q9Y597 815 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 SNX13Q9Y5W8 968 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 LOC102724159A0A0B4J2E5 919 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 FGF10O15520 208 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 KCNE1P15382 129 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 RGS4P49798 205 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 PWP2Q15269 919 aaKnown RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 TMEM154Q6P9G4 183 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 FAM151BQ6UXP7 276 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 C11orf96Q7Z7L8 435 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 DPF3Q92784 378 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 THUMPD3Q9BV44 507 aaKnown RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 MRPL9Q9BYD2 267 aaKnown RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 ZDHHC6Q9H6R6 413 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 NHSQ6T4R5 1651 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 CHRNGP07510 517 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 TAS2R39P59534 338 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 PDE1CQ14123 709 aaPredicted RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 NR6A1Q15406 480 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 CAND1Q86VP6 1230 aaKnown RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 FBXO39Q8N4B4 442 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF333Q96JL9 665 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 DNAJC1Q96KC8 554 aaKnown RBP11.11□□□□□ -0.63
TOP3A-201ENST00000321105 TEKT5Q96M29 485 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 TAS2R13Q9NYV9 303 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 SOX13Q9UN79 622 aa11.11□□□□□ -0.63
TOP3A-201ENST00000321105 C1orf232A0A0U1RR37 186 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 F8W8V4 182 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 IRAK2O43187 625 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 MAP4P27816 1152 aaKnown RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 MRPS22P82650 360 aaKnown RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 PTK2BQ14289 1009 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ATXN7L2Q5T6C5 722 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ARMC12Q5T9G4 340 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 PLPP4Q5VZY2 271 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 CNSTQ6PJW8 725 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 BANPQ8N9N5 519 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 DCAKDQ8WVC6 231 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 NPY6RQ99463 290 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 CCDC90BQ9GZT6 254 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 NMUR1Q9HB89 426 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 THEGQ9P2T0 379 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 IQCF5A8MTL0 148 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 FGFR3P22607 806 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 CDH5P33151 784 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 CCR10P46092 362 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ARL13AQ5H913 290 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 CLEC6AQ6EIG7 209 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 FBXL22Q6P050 247 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 IYDQ6PHW0 289 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 IZUMO2Q6UXV1 221 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ZNF598Q86UK7 904 aaKnown RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 GSTCDQ8NEC7 633 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 SLCO2A1Q92959 643 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 DRC3Q9H069 523 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 MRPL46Q9H2W6 279 aaKnown RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ASB8Q9H765 288 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 EFCAB1Q9HAE3 211 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 PKD2L2Q9NZM6 624 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 GNEQ9Y223 722 aaKnown RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 TEX264Q9Y6I9 313 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ZFP37Q9Y6Q3 630 aaPredicted RBP11.1□□□□□ -0.63
TOP3A-201ENST00000321105 A0A0U1RQS6 177 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 ITM2AO43736 263 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 USP1O94782 785 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 RBP1P09455 135 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 RAB10P61026 200 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 PRKAA1Q13131 559 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 CCDC153Q494R4 210 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 TXNDC8Q6A555 127 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 PKN3Q6P5Z2 889 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 RIPOR1Q6ZS17 1223 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 TMPRSS6Q8IU80 811 aa11.1□□□□□ -0.63
TOP3A-201ENST00000321105 OR13C4Q8NGS5 318 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms