RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PAPLNO95428 1278 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 VIMP08670 466 aaKnown RBP18.04■□□□□ 0.48
RAB39A-201ENST00000320578 TAC1P20366 129 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 MAGEA12P43365 314 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 ERVK-21P61565 698 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 ILF2Q12905 390 aaKnown RBP18.04■□□□□ 0.48
RAB39A-201ENST00000320578 CYTH1Q15438 398 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 PCSK7Q16549 785 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 UGP2Q16851 508 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 HSP90AA5PQ58FG0 334 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 DCAF4L2Q8NA75 395 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 TDRD5Q8NAT2 981 aaKnown RBP18.04■□□□□ 0.48
RAB39A-201ENST00000320578 GABPB2Q8TAK5 448 aaPredicted RBP18.04■□□□□ 0.48
RAB39A-201ENST00000320578 GDAP1Q8TB36 358 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 GRAMD1AQ96CP6 724 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 PLLPQ9Y342 182 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 PSAT1Q9Y617 370 aa18.04■□□□□ 0.48
RAB39A-201ENST00000320578 MROH6A6NGR9 719 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 TCP11X1B4DZS4 312 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 GOLGA8RI6L899 631 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 INSIG1O15503 277 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 MOSPD3O75425 235 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 CCR2P41597 374 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 ARF5P84085 180 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 BMPR2Q13873 1038 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 INSCQ1MX18 579 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 STRA8Q7Z7C7 330 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 METTL3Q86U44 580 aaKnown RBP18.03■□□□□ 0.48
RAB39A-201ENST00000320578 CMTM8Q8IZV2 173 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 CARNMT1Q8N4J0 409 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 IFT43Q96FT9 208 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 CABS1Q96KC9 395 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 NUDCD1Q96RS6 583 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 TRIB3Q96RU7 358 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 SRPK1Q96SB4 655 aaKnown RBP18.03■□□□□ 0.48
RAB39A-201ENST00000320578 KLF6Q99612 283 aaPredicted RBP18.03■□□□□ 0.48
RAB39A-201ENST00000320578 RABEP2Q9H5N1 569 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 MLXIPLQ9NP71 852 aa18.03■□□□□ 0.48
RAB39A-201ENST00000320578 CBX4O00257 560 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 NDST3O95803 873 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 RHOP08100 348 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 FOXN2P32314 431 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 IRS1P35568 1242 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 CHRNA4P43681 627 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 PLK1P53350 603 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 SLC12A1Q13621 1099 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 CDH18Q13634 790 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 DBN1Q16643 649 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 SIRPB2Q5JXA9 342 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 TSTD2Q5T7W7 516 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 GPR158Q5T848 1215 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 KIAA0408Q6ZU52 694 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 MICALCLQ6ZW33 695 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 LMNTD2Q8IXW0 634 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 KIAA1958Q8N8K9 716 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 FIBINQ8TAL6 211 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 ACDQ96AP0 544 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 ZNF778Q96MU6 729 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 FAM167BQ9BTA0 163 aa18.02■□□□□ 0.48
RAB39A-201ENST00000320578 IQCGQ9H095 443 aaKnown RBP18.02■□□□□ 0.48
RAB39A-201ENST00000320578 ARHGEF15O94989 841 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 CD160O95971 181 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 ALDOAP04075 364 aaKnown RBP18.02■□□□□ 0.47
RAB39A-201ENST00000320578 GLDCP23378 1020 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 AVPR1AP37288 418 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 QPCTQ16769 361 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 FSCBQ5H9T9 825 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 ESRP1Q6NXG1 681 aaKnown RBP18.02■□□□□ 0.47
RAB39A-201ENST00000320578 GALNT7Q86SF2 657 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 BBS7Q8IWZ6 715 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 CALML6Q8TD86 181 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 ATP2A3Q93084 1043 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 SEC16BQ96JE7 1060 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 FAM107BQ9H098 131 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 IARS2Q9NSE4 1012 aaKnown RBP18.02■□□□□ 0.47
RAB39A-201ENST00000320578 KIAA1522Q9P206 1035 aaPredicted RBP18.02■□□□□ 0.47
RAB39A-201ENST00000320578 DCDC2Q9UHG0 476 aa18.02■□□□□ 0.47
RAB39A-201ENST00000320578 NRG2O14511 850 aaPredicted RBP18.01■□□□□ 0.47
RAB39A-201ENST00000320578 ZNF197O14709 1029 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 RFPL2O75678 378 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 CYBBP04839 570 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 ARNTP27540 789 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 SERPINB8P50452 374 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 HNRNPH2P55795 449 aaKnown RBP18.01■□□□□ 0.47
RAB39A-201ENST00000320578 PDE1BQ01064 536 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 ACVR1Q04771 509 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 PRSS36Q5K4E3 855 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 FOXR1Q6PIV2 292 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 KYAT3Q6YP21 454 aaKnown RBP18.01■□□□□ 0.47
RAB39A-201ENST00000320578 MFN1Q8IWA4 741 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 CACNA2D3Q8IZS8 1091 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 NDUFAF2Q8N183 169 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 SLC25A41Q8N5S1 370 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 ZNF557Q8N988 423 aaPredicted RBP18.01■□□□□ 0.47
RAB39A-201ENST00000320578 LRRC8CQ8TDW0 803 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 SH3RF2Q8TEC5 729 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 DDI1Q8WTU0 396 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 AGAP2Q99490 1192 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 PAIP2Q9BPZ3 127 aaKnown RBP18.01■□□□□ 0.47
RAB39A-201ENST00000320578 C2orf49Q9BVC5 232 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms