RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 DPY19L2P1Q6NXN4 242 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 DENND1BQ6P3S1 775 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 SRRM1Q8IYB3 904 aaKnown RBP13.46□□□□□ -0.25
SYCN-201ENST00000318438 TMEM74Q96NL1 305 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 SLC4A5Q9BY07 1137 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 ST7Q9NRC1 585 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 TAB2Q9NYJ8 693 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 GULP1Q9UBP9 304 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 PCDHGC3Q9UN70 934 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 HS3ST3A1Q9Y663 406 aa13.46□□□□□ -0.25
SYCN-201ENST00000318438 RNF103O00237 685 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 KPNA3O00505 521 aaPredicted RBP13.45□□□□□ -0.26
SYCN-201ENST00000318438 MCF2LO15068 1137 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 SEMA7AO75326 666 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 CTSLP07711 333 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 TPM2P07951 284 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 GNLYP22749 145 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 NOS2P35228 1153 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 RABIFP47224 123 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 PTK2Q05397 1052 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 PDCLQ13371 301 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 KRT31Q15323 416 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 DLG2Q15700 870 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 KLHDC7AQ5VTJ3 777 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 ESRP1Q6NXG1 681 aaKnown RBP13.45□□□□□ -0.26
SYCN-201ENST00000318438 TICAM1Q8IUC6 712 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 LGI2Q8N0V4 545 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 KYQ8NBH2 561 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 FAM174AQ8TBP5 190 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 CLEC4CQ8WTT0 213 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 DDX50Q9BQ39 737 aaKnown RBP13.45□□□□□ -0.26
SYCN-201ENST00000318438 LRRC61Q9BV99 259 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 TRIM62Q9BVG3 475 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 MIS12Q9H081 205 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 FANCLQ9NW38 375 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 SIRPGQ9P1W8 387 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 SPASTQ9UBP0 616 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 APOBEC3BQ9UH17 382 aaKnown RBP13.45□□□□□ -0.26
SYCN-201ENST00000318438 XPO7Q9UIA9 1087 aaKnown RBP13.45□□□□□ -0.26
SYCN-201ENST00000318438 PNMA8BQ9ULN7 279 aaPredicted RBP13.45□□□□□ -0.26
SYCN-201ENST00000318438 FHOD1Q9Y613 1164 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 NF1P21359 2839 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 SCN8AQ9UQD0 1980 aa13.45□□□□□ -0.26
SYCN-201ENST00000318438 ADGRG4Q8IZF6 3080 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 PRR19A6NJB7 356 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 E5RJQ4 531 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 LMO7DNF2Z398 122 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 FOXN3O00409 490 aaPredicted RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 ALOX15BO15296 676 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 YY2O15391 372 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 ATP9BO43861 1147 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 MOCS2O96007 188 aaPredicted RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 PAK4O96013 591 aaPredicted RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 ANXA6P08133 673 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 CELA2BP08218 269 aaPredicted RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 LIFP15018 202 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 UCHL3P15374 230 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 CLCN1P35523 988 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 OXCT1P55809 520 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 BPIFB4P59827 614 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 TYRO3Q06418 890 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 RAPGEF1Q13905 1077 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 CAPRIN2Q6IMN6 1127 aaKnown RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 BEND5Q7L4P6 421 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 TMEM110Q86TL2 294 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 CIR1Q86X95 450 aaPredicted RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 ABHD17AQ96GS6 310 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 FCRL2Q96LA5 508 aaPredicted RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 NAA15Q9BXJ9 866 aaKnown RBP13.44□□□□□ -0.26
SYCN-201ENST00000318438 SLC17A9Q9BYT1 436 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 CLPBQ9H078 707 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 CELSR1Q9NYQ6 3014 aa13.44□□□□□ -0.26
SYCN-201ENST00000318438 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.43□□□□□ -0.26
SYCN-201ENST00000318438 FYNP06241 537 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
SYCN-201ENST00000318438 SULT2A1Q06520 285 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 KLRB1Q12918 225 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 NNTQ13423 1086 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 TCEA2Q15560 299 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 LACTB2Q53H82 288 aaPredicted RBP13.43□□□□□ -0.26
SYCN-201ENST00000318438 FKBP15Q5T1M5 1219 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 RAP1GAP2Q684P5 730 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 PHACTR4Q8IZ21 702 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 ARL10Q8N8L6 244 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 BTN2A2Q8WVV5 523 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 NKD1Q969G9 470 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 FAM149B1Q96BN6 582 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 SLC39A13Q96H72 371 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 NAT10Q9H0A0 1025 aaKnown RBP13.43□□□□□ -0.26
SYCN-201ENST00000318438 VPS16Q9H269 839 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 LRRN3Q9H3W5 708 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 LIMA1Q9UHB6 759 aaKnown RBP13.43□□□□□ -0.26
SYCN-201ENST00000318438 TLR6Q9Y2C9 796 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 DAAM1Q9Y4D1 1078 aa13.43□□□□□ -0.26
SYCN-201ENST00000318438 RP1L1Q8IWN7 2480 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms