RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 FNDC8Q8TC99 324 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 DQX1Q8TE96 717 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 DLG3Q92796 817 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MFSD14AQ96MC6 490 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 STN1Q9H668 368 aaKnown RBP7.61□□□□□ -1.19
CDHR3-201ENST00000317716 PCDH18Q9HCL0 1135 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 LIMD1Q9UGP4 676 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 HMGXB4Q9UGU5 601 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 NDUFAF1Q9Y375 327 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MFHAS1Q9Y4C4 1052 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 MICAL3Q7RTP6 2002 aa7.61□□□□□ -1.19
CDHR3-201ENST00000317716 VNN1O95497 513 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF682O95780 498 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 VTNP04004 478 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SNRPB2P08579 225 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PAX3P23760 479 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 MRPS5P82675 430 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 MS4A2Q01362 244 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SEMA5AQ13591 1074 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PDK2Q15119 407 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 LY6KQ17RY6 165 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 EFCAB12Q6NXP0 572 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 CRTC3Q6UUV7 619 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PAGE2Q7Z2X7 111 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ADGRF2Q8IZF7 708 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 OR52K2Q8NGK3 314 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 UBASH3BQ8TF42 649 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 BRI3BPQ8WY22 251 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 NXNL1Q96CM4 212 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 NSMCE2Q96MF7 247 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PRICKLE1Q96MT3 831 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 EGFL8Q99944 293 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ADI1Q9BV57 179 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 EIF2AQ9BY44 585 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF518BQ9C0D4 1074 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PORCNQ9H237 461 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 POPDC2Q9HBU9 364 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ENTPD7Q9NQZ7 604 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PCDH10Q9P2E7 1040 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PRPF19Q9UMS4 504 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 OAZ3Q9UMX2 235 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 RAP2CQ9Y3L5 183 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 TIMM13Q9Y5L4 95 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 FAM95CA0A1B0GW59 222 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SYNDIG1LA6NDD5 238 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 RAD51BO15315 384 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 KATNA1O75449 491 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 CAPN15O75808 1086 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 WDR47O94967 919 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 C4BPAP04003 597 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 STAG3L1P0CL83 205 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 AOC1P19801 751 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 CNTFP26441 200 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 TCF7P36402 384 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ARHGDIAP52565 204 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 NDST2P52849 883 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 WNT7BP56706 349 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 MYBPC1Q00872 1141 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 CEACAM7Q14002 265 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 TIGD2Q4W5G0 525 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PAN2Q504Q3 1202 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 FGD3Q5JSP0 725 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 TAF2Q6P1X5 1199 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 GALNT5Q7Z7M9 940 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF410Q86VK4 478 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SPNS2Q8IVW8 549 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 AHI1Q8N157 1196 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 RDM1Q8NG50 284 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 BLOC1S5Q8TDH9 187 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 GAB3Q8WWW8 586 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 LPAR1Q92633 364 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 RORBQ92753 470 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ZBTB18Q99592 522 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SPON2Q9BUD6 331 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 C9orf16Q9BUW7 83 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 R3HDMLQ9H3Y0 253 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PXMP2Q9NR77 195 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SLC8A2Q9UPR5 921 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 TEX264Q9Y6I9 313 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 A8MV72 311 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 C19orf81C9J6K1 198 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 PIRTP0C851 137 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 MYL4P12829 197 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ACO1P21399 889 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SNRPFP62306 86 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 RBP5P82980 135 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 VAC14Q08AM6 782 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 GRM3Q14832 879 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 AARS2Q5JTZ9 985 aaKnown RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 GRTP1Q5TC63 336 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SPRYD7Q5W111 196 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 FSTL4Q6MZW2 842 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SLC39A4Q6P5W5 647 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 UGT2A3Q6UWM9 527 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ARHGAP36Q6ZRI8 547 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 FRA10AC1Q70Z53 315 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 FAM35AQ86V20 835 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 P3H2Q8IVL5 708 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 ZC3H7AQ8IWR0 971 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms