RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FNIP1Q8TF40 1166 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 TSC1Q92574 1164 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 BMFQ96LC9 184 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 C1QTNF2Q9BXJ5 285 aa18.01■□□□□ 0.47
TPM1-203ENST00000317516 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
TPM1-203ENST00000317516 UBA2Q9UBT2 640 aaPredicted RBP18.01■□□□□ 0.47
TPM1-203ENST00000317516 CNOT8Q9UFF9 292 aaKnown RBP18.01■□□□□ 0.47
TPM1-203ENST00000317516 IPO11Q9UI26 975 aaKnown RBP18.01■□□□□ 0.47
TPM1-203ENST00000317516 IGLON5A6NGN9 336 aa18■□□□□ 0.47
TPM1-203ENST00000317516 EEF2KO00418 725 aaKnown RBP18■□□□□ 0.47
TPM1-203ENST00000317516 SDC3O75056 442 aa18■□□□□ 0.47
TPM1-203ENST00000317516 CAPNS1P04632 268 aa18■□□□□ 0.47
TPM1-203ENST00000317516 ALPPL2P10696 532 aa18■□□□□ 0.47
TPM1-203ENST00000317516 XPAP23025 273 aaPredicted RBP18■□□□□ 0.47
TPM1-203ENST00000317516 ACADVLP49748 655 aa18■□□□□ 0.47
TPM1-203ENST00000317516 ZNF135P52742 658 aaPredicted RBP18■□□□□ 0.47
TPM1-203ENST00000317516 HNRNPKP61978 463 aaKnown RBP eCLIP18■□□□□ 0.47
TPM1-203ENST00000317516 KYAT3Q6YP21 454 aaKnown RBP18■□□□□ 0.47
TPM1-203ENST00000317516 PTAR1Q7Z6K3 402 aaPredicted RBP18■□□□□ 0.47
TPM1-203ENST00000317516 PSTKQ8IV42 348 aaKnown RBP18■□□□□ 0.47
TPM1-203ENST00000317516 DENND6BQ8NEG7 585 aa18■□□□□ 0.47
TPM1-203ENST00000317516 C1QTNF7Q9BXJ2 289 aa18■□□□□ 0.47
TPM1-203ENST00000317516 CPEB1Q9BZB8 566 aaKnown RBP18■□□□□ 0.47
TPM1-203ENST00000317516 DKK3Q9UBP4 350 aa18■□□□□ 0.47
TPM1-203ENST00000317516 PCSK1NQ9UHG2 260 aa18■□□□□ 0.47
TPM1-203ENST00000317516 BZW2Q9Y6E2 419 aaKnown RBP18■□□□□ 0.47
TPM1-203ENST00000317516 PLXNA2O75051 1894 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 TRABD2BA6NFA1 517 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 DDX3XO00571 662 aaKnown RBP eCLIP17.99■□□□□ 0.471e-11■■■■□ 19.9
TPM1-203ENST00000317516 ABL2P42684 1182 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 SUOXP51687 545 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 FGL2Q14314 439 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 ACAP1Q15027 740 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 VPS36Q86VN1 386 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 DNAAF5Q86Y56 855 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 SLC25A45Q8N413 288 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 HCAR2Q8TDS4 363 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 CXorf40AQ8TE69 158 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 ZNF653Q96CK0 615 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 FUCA2Q9BTY2 467 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 KLC2Q9H0B6 622 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 LRRC19Q9H756 370 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 EVA1BQ9NVM1 165 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 GPATCH2LQ9NWQ4 482 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 DOCK4Q8N1I0 1966 aa17.99■□□□□ 0.47
TPM1-203ENST00000317516 SPTY2D1-AS1A0A0U1RR47 76 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 FAM149AA5PLN7 773 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 POM121BA6NF01 834 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 GOLGA6L19H0YKK7 550 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 H3BM21 787 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 AREL1O15033 823 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 ATMINO43313 823 aaPredicted RBP17.98■□□□□ 0.47
TPM1-203ENST00000317516 SIGLEC6O43699 453 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 PIAS2O75928 621 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 SKILP12757 684 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 ACP1P24666 158 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 MIPP30301 263 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 DAB2P98082 770 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 E2F1Q01094 437 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 CYTH1Q15438 398 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 KLHL40Q2TBA0 621 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 PROX2Q3B8N5 592 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 CFAP58Q5T655 872 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 SLC22A18ASQ8N1D0 253 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 OR4C6Q8NH72 309 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 IQCDQ96DY2 449 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 DUSP23Q9BVJ7 150 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 ISCUQ9H1K1 167 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 DNAJC28Q9NX36 388 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 DKK4Q9UBT3 224 aa17.98■□□□□ 0.47
TPM1-203ENST00000317516 SYCE3A1L190 88 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 TAF4O00268 1085 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 TRIM38O00635 465 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 RAD51BO15315 384 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 PRAMEF11O60813 436 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 TM7SF2O76062 418 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 PTMSP20962 102 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 HCAR3P49019 387 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 UBASH3AP57075 661 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 FANCCQ00597 558 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 ELP6Q0PNE2 266 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 PTK2BQ14289 1009 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 TDRD12Q587J7 1177 aaKnown RBP17.97■□□□□ 0.47
TPM1-203ENST00000317516 PPP6R3Q5H9R7 873 aaPredicted RBP17.97■□□□□ 0.47
TPM1-203ENST00000317516 RFX8Q6ZV50 586 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 PARGQ86W56 976 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 LZTR1Q8N653 840 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 ARFGAP1Q8N6T3 406 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 MDM1Q8TC05 714 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 SYN2Q92777 582 aaPredicted RBP17.97■□□□□ 0.47
TPM1-203ENST00000317516 CELF6Q96J87 481 aaKnown RBP17.97■□□□□ 0.47
TPM1-203ENST00000317516 ZNF641Q96N77 438 aaPredicted RBP17.97■□□□□ 0.47
TPM1-203ENST00000317516 KLF6Q99612 283 aaPredicted RBP17.97■□□□□ 0.47
TPM1-203ENST00000317516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.97■□□□□ 0.47
TPM1-203ENST00000317516 SNRNP25Q9BV90 132 aaKnown RBP17.97■□□□□ 0.47
TPM1-203ENST00000317516 SLC39A8Q9C0K1 460 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 ZWILCHQ9H900 591 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 CBX8Q9HC52 389 aa17.97■□□□□ 0.47
TPM1-203ENST00000317516 UCKL1Q9NWZ5 548 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms