RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 SLC2A3P11169 496 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 RHOQP17081 205 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 SLC1A6P48664 564 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 RCN2Q14257 317 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 TIGD7Q6NT04 549 aaPredicted RBP12.57□□□□□ -0.4
RNF4-201ENST00000314289 KYAT3Q6YP21 454 aaKnown RBP12.57□□□□□ -0.4
RNF4-201ENST00000314289 ANKS3Q6ZW76 656 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 MFSD6LQ8IWD5 586 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 ARHGAP18Q8N392 663 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 MKS1Q9NXB0 559 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 COPG2Q9UBF2 871 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 DCDC2Q9UHG0 476 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 ATP11BQ9Y2G3 1177 aa12.57□□□□□ -0.4
RNF4-201ENST00000314289 OR51F1A6NGY5 319 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 FCHO1O14526 889 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 TBC1D4O60343 1298 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CACNG3O60359 315 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 KRT36O76013 467 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 RTN3O95197 1032 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 SLC4A1P02730 911 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 PTPN4P29074 926 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CA8P35219 290 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 ADRA1AP35348 466 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SLC1A2P43004 574 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SERPINB8P50452 374 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 GEMP55040 296 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 WASHC2DQ5SRD0 308 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 RANBP10Q6VN20 620 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 NAPRTQ6XQN6 538 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 ZC3HC1Q86WB0 502 aaKnown RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 CEP97Q8IW35 865 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 UMODL1-AS1Q8N2C9 162 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 PPHLN1Q8NEY8 458 aaKnown RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 OR7D4Q8NG98 312 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 KCTD4Q8WVF5 259 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 WBP2Q969T9 261 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 FAM136AQ96C01 138 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SGF29Q96ES7 293 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SMIM14Q96QK8 99 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CFHR5Q9BXR6 569 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CYP4F11Q9HBI6 524 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 HBS1LQ9Y450 684 aaKnown RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 MTF2Q9Y483 593 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 MAGEB16A2A368 324 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CPA3P15088 417 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SGSHP51688 502 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 USP4Q13107 963 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 PTAR1Q7Z6K3 402 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 ENDOVQ8N8Q3 282 aaKnown RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 OMDQ99983 421 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 TASP1Q9H6P5 420 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SUDS3Q9H7L9 328 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 DCLRE1BQ9H816 532 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 TMEM248Q9NWD8 314 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CLIC5Q9NZA1 410 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 IL37Q9NZH6 218 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 FAM92AA1XBS5 289 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 KLF11O14901 512 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 AHCYL1O43865 530 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SNNO75324 88 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 FESP07332 822 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CCL5P13501 91 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 ACADSP16219 412 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 TACR2P21452 398 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SP100P23497 879 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 RENBPP51606 427 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 UBAP2LQ14157 1087 aaKnown RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 FAM219BQ5XKK7 198 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 C16orf59Q7L2K0 433 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 LRRC43Q8N309 656 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 C7orf26Q96N11 449 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 SEMA3CQ99985 751 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 TCAF1Q9Y4C2 921 aa12.56□□□□□ -0.4
RNF4-201ENST00000314289 ZFP37Q9Y6Q3 630 aaPredicted RBP12.56□□□□□ -0.4
RNF4-201ENST00000314289 MIA3Q5JRA6 1907 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 C2orf78A6NCI8 922 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 GNRH1P01148 92 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 ENO1P06733 434 aaKnown RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 MMP2P08253 660 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 RALBP11234 206 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 COL6A1P12109 1028 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 ARCN1P48444 511 aaKnown RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 POLE2P56282 527 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 PLD1Q13393 1074 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 GALNT3Q14435 633 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 KPNB1Q14974 876 aaKnown RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 SNX30Q5VWJ9 437 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 PDPK2PQ6A1A2 396 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 FBXO27Q8NI29 283 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 RNF217Q8TC41 542 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 ACMSDQ8TDX5 336 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 APBB2Q92870 758 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 SCYL1Q96KG9 808 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms