RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 RPS6KL1Q9Y6S9 549 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 A0A1W2PRG6 482 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TRUB2O95900 331 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 ITGAVP06756 1048 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 RBL1P28749 1068 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 SLC11A2P49281 568 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 NME5P56597 212 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 PDCD4Q53EL6 469 aaKnown RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 ARMC6Q6NXE6 501 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 DHRSXQ8N5I4 330 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TSPAN17Q96FV3 270 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 MAGED4Q96JG8 741 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 MLPHQ9BV36 600 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 NCF1BA6NI72 391 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 NCF1CA8MVU1 366 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 CCNKO75909 580 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 SEC24AO95486 1093 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 PRLP01236 227 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 EDN1P05305 212 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 ODC1P11926 461 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 NCF1P14598 390 aaPredicted RBP9.38□□□□□ -0.91
XCR1-201ENST00000309285 ARHGAP15Q53QZ3 475 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 DENND5BQ6ZUT9 1274 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 BRI3BPQ8WY22 251 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 RORBQ92753 470 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 RFT1Q96AA3 541 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 ZNF333Q96JL9 665 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TBCBQ99426 244 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 CEP41Q9BYV8 373 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 EPS8L2Q9H6S3 715 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 AAASQ9NRG9 546 aa9.38□□□□□ -0.91
XCR1-201ENST00000309285 TSPAN4O14817 238 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 GPR182O15218 404 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 THP07101 528 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 ATP6V1B2P21281 511 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 FASP25445 335 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 PTGS2P35354 604 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 OGDHQ02218 1023 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TUBB3Q13509 450 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 DPYSL3Q14195 570 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 FSCN1Q16658 493 aaKnown RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 FAM110CQ1W6H9 321 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 CXCL17Q6UXB2 119 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 SNX32Q86XE0 403 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 GAD1Q99259 594 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 SEPHS2Q99611 448 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TRPV5Q9NQA5 729 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 USE1Q9NZ43 259 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 UBP1Q9NZI7 540 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 PRKAG3Q9UGI9 489 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 COL11A2P13942 1736 aaPredicted RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 BOLA2-SMG1P6H3BVE0 249 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 AMPD1P23109 780 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 IL5RAQ01344 420 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 EFR3AQ14156 821 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 FASTKD3Q14CZ7 662 aaKnown RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 KLHL24Q6TFL4 600 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 ZDHHC14Q8IZN3 488 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 DEFB106AQ8N104 65 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 CARNMT1Q8N4J0 409 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 ZNF614Q8N883 585 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 OR7A2PQ8NGA2 310 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 RASSF5Q8WWW0 418 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 PGLYRP2Q96PD5 576 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 SNRNP25Q9BV90 132 aaKnown RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 EBF3Q9H4W6 596 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 CHST12Q9NRB3 414 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 PMF1-BGLAPU3KQ54 211 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 SLC12A8A0AV02 714 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 SLC15A5A6NIM6 579 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 H0YGN5 161 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 USP12O75317 370 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 SUPT7LO94864 414 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 CREB1P16220 341 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 AVPR1AP37288 418 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 ABCE1P61221 599 aaKnown RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 TUBA1BP68363 451 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TUBA4AP68366 448 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TRAF3Q13114 568 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 FAM182AQ5T1J6 154 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 PMF1Q6P1K2 205 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 NEK5Q6P3R8 708 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 LCLAT1Q6UWP7 414 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TUBA1AQ71U36 451 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TFB1MQ8WVM0 346 aaKnown RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 PIH1D1Q9NWS0 290 aaKnown RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 RABL2AQ9UBK7 228 aaPredicted RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 SLC12A4Q9UP95 1085 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 TMED5Q9Y3A6 229 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 NFS1Q9Y697 457 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 GUCA1CO95843 209 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 ENO2P09104 434 aaPredicted RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 TGM2P21980 687 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 PBLDP30039 288 aaPredicted RBP9.37□□□□□ -0.91
XCR1-201ENST00000309285 TKTL1P51854 596 aa9.37□□□□□ -0.91
XCR1-201ENST00000309285 YWHAZP63104 245 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms