RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 VIPR2P41587 438 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 SKOR1P84550 965 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 MPP3Q13368 585 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ADAM15Q13444 863 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 STAT4Q14765 748 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 FAM78AQ5JUQ0 283 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 CERCAMQ5T4B2 595 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 AGBL2Q5U5Z8 902 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 STEAP4Q687X5 459 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 NAPEPLDQ6IQ20 393 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 GET4Q7L5D6 327 aaPredicted RBP7.06□□□□□ -1.28
PTCD2-201ENST00000308077 CELF5Q8N6W0 485 aaKnown RBP7.06□□□□□ -1.28
PTCD2-201ENST00000308077 GOLGA6L1Q8N7Z2 621 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 DCAF4L2Q8NA75 395 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ST13P5Q8NFI4 369 aaPredicted RBP7.06□□□□□ -1.28
PTCD2-201ENST00000308077 FGF13Q92913 245 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 STAMBPL1Q96FJ0 436 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ASIC4Q96FT7 647 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ATP6V1G3Q96LB4 118 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ASB16Q96NS5 453 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 XPO6Q96QU8 1125 aaKnown RBP7.06□□□□□ -1.28
PTCD2-201ENST00000308077 SEMA3CQ99985 751 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 MGME1Q9BQP7 344 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ROPN1BQ9BZX4 212 aaPredicted RBP7.06□□□□□ -1.28
PTCD2-201ENST00000308077 POLR1EQ9GZS1 481 aaKnown RBP7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ACSS3Q9H6R3 686 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 ROPN1Q9HAT0 212 aaPredicted RBP7.06□□□□□ -1.28
PTCD2-201ENST00000308077 SPHK2Q9NRA0 654 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 CLEC1BQ9P126 229 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 VPS28Q9UK41 221 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 KMT2EQ8IZD2 1858 aa7.06□□□□□ -1.28
PTCD2-201ENST00000308077 EXOC1LA0A1B0GW35 172 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 GOLGA6CA6NDK9 693 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 GOLGA6L10A6NI86 522 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 FOXO6A8MYZ6 492 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 NEDD8-MDP1E9PL57 170 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TBX10O75333 385 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TMCC1O94876 653 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 MT-CO1P00395 513 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CYBBP04839 570 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 GOLGA6DP0CG33 693 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TPH1P17752 444 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CR2P20023 1033 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 FCARP24071 287 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 HLA-FP30511 346 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PHBP35232 272 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CHRNA4P43681 627 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 WNT3AP56704 352 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 DLX2Q07687 328 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CDH17Q12864 832 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 RFTN1Q14699 578 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PCSK7Q16549 785 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 SKIDA1Q1XH10 827 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PLEKHG6Q3KR16 790 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TNFAIP8L3Q5GJ75 292 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 LY6G5CQ5SRR4 150 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TRIM68Q6AZZ1 485 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TRMT10BQ6PF06 316 aaKnown RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 RANBP10Q6VN20 620 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 KDELC2Q7Z4H8 507 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 RNF135Q8IUD6 432 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 UNC5BQ8IZJ1 945 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 ADGRG2Q8IZP9 1017 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CYP4X1Q8N118 509 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 DNAAF3Q8N9W5 541 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 ATOH1Q92858 354 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 IRF7Q92985 503 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TLCD1Q96CP7 247 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PGM2Q96G03 612 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 EXOC2Q96KP1 924 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PSKH2Q96QS6 385 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CINPQ9BW66 212 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 BBS2Q9BXC9 721 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 KIF9Q9HAQ2 790 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 SMYD2Q9NRG4 433 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 ABCB8Q9NUT2 735 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 GOLGA6AQ9NYA3 693 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 VPS18Q9P253 973 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 BCCIPQ9P287 314 aaKnown RBP eCLIP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TBC1D14Q9P2M4 693 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 LHX3Q9UBR4 397 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 SEPT3Q9UH03 358 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 NOVA2Q9UNW9 492 aaKnown RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CXorf49A8MYA2 514 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 HMGB1P1B2RPK0 211 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-201ENST00000308077 POC1B-GALNT4F8VUJ3 575 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 K7ERQ8 282 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 ATP9BO43861 1147 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 SPAG6O75602 509 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CYP17A1P05093 508 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 TYRP14679 529 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PGAM1P18669 254 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PLK1P53350 603 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 PPARDQ03181 441 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CRYMQ14894 314 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 EML3Q32P44 896 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 KBTBD12Q3ZCT8 623 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 FUT11Q495W5 492 aa7.05□□□□□ -1.28
PTCD2-201ENST00000308077 CASC4Q6P4E1 433 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms