RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PHF13Q86YI8 300 aaPredicted RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM120BQ96EK7 910 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 MAGED4Q96JG8 741 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PGLYRP2Q96PD5 576 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ELAC1Q9H777 363 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 POLR1BQ9H9Y6 1135 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 EFCAB1Q9HAE3 211 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 BLOC1S4Q9NUP1 217 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 NCKIPSDQ9NZQ3 722 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ABI3Q9P2A4 366 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 V9GYQ6 96 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 BTNL10A8MVZ5 291 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 TRUB2O95900 331 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 IFNA16P05015 189 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 RCVRNP35243 200 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 CLCN6P51797 869 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 FAAH2Q6GMR7 532 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 MCEMP1Q8IX19 187 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 IZUMO1Q8IYV9 350 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 TLR9Q9NR96 1032 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 MARCOQ9UEW3 520 aaPredicted RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 AMACRQ9UHK6 382 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 BCLAF3A2AJT9 711 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 F2P00734 622 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 FGF1P05230 155 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF23P17027 643 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 TCN1P20061 433 aaPredicted RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ZMYND11Q15326 602 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ADRM1Q16186 407 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ATP13A4Q4VNC1 1196 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PARP9Q8IXQ6 854 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PROX1Q92786 737 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 TCF25Q9BQ70 676 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 THAP2Q9H0W7 228 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 CDH19Q9H159 772 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ISCUQ9H1K1 167 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 CAAP1Q9H8G2 361 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 MRTO4Q9UKD2 239 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 ARL5CA6NH57 179 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 SGPL1O95470 568 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 SPDYCQ5MJ68 293 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 GALNT4Q8N4A0 578 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM71DQ8N9W8 422 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 RAD9AQ99638 391 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PRMT1Q99873 361 aaKnown RBP8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PDCD10Q9BUL8 212 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 PYCARDQ9ULZ3 195 aa8.41□□□□□ -1.06
PCDHB1-201ENST00000306549 H3BNH8 94 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 LDOC1O95751 146 aaPredicted RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM228BP0C875 321 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 THRAP10827 490 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 SCNN1AP37088 669 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 TGFBR2P37173 567 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MAGEA4P43358 317 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 TLE2Q04725 743 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 TRIP10Q15642 601 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 FUT11Q495W5 492 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 C2CD6Q53TS8 623 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 RALGPS1Q5JS13 557 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 LCLAT1Q6UWP7 414 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 TC2NQ8N9U0 490 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 KLHL23Q8NBE8 558 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 ZFP28Q8NHY6 868 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 RIT1Q92963 219 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 NCF1BA6NI72 391 aaPredicted RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 NCF1CA8MVU1 366 aaPredicted RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 NPC1O15118 1278 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CCNB2O95067 398 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CATP04040 527 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 NCF1P14598 390 aaPredicted RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 TMED10P49755 219 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CDK7P50613 346 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MARK2Q7KZI7 788 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 R3HCC1LQ7Z5L2 792 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 SCUBE3Q8IX30 993 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 ULK2Q8IYT8 1036 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 TDRD5Q8NAT2 981 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 DENND1AQ8TEH3 1009 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 NACC2Q96BF6 587 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 OTUB2Q96DC9 234 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CXorf40BQ96DE9 158 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MARK1Q9P0L2 795 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 ZBTB14O43829 449 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 TSHRP16473 764 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 HOXB6P17509 224 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 FUT2Q10981 343 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 RFTN1Q14699 578 aaPredicted RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 PRMT9Q6P2P2 845 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CACTIN-AS1Q8N1I8 211 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MBOAT7Q96N66 472 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 YIPF3Q9GZM5 350 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MANSC1Q9H8J5 431 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 PAIP2BQ9ULR5 123 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 SPATA2Q9UM82 520 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 GABRR2P28476 465 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 DPP6P42658 865 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MRPS5P82675 430 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms