RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LIPMQ5VYY2 423 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 C2orf49Q9BVC5 232 aaPredicted RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 POLR2EP19388 210 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 MAPK9P45984 424 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ADARP55265 1226 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 TRABD2AQ86V40 505 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ENKURQ8TC29 256 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 CENPIQ92674 756 aaPredicted RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 FAM84AQ96KN4 292 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 MFSD14AQ96MC6 490 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 THG1LQ9NWX6 298 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ROBO3Q96MS0 1386 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 CATP04040 527 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 GJB1P08034 283 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 IDH2P48735 452 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 CTBP1Q13363 440 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ARHGAP22Q7Z5H3 698 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 TINF2Q9BSI4 451 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 MRIQ9BWK5 157 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ERVK-5Q9HDB9 667 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 RIMS1Q86UR5 1692 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 YDJCA8MPS7 323 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 GTF2E2P29084 291 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 IFNGR2P38484 337 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 PIWIL4Q7Z3Z4 852 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 TSPAN14Q8NG11 270 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 GRIN3AQ8TCU5 1115 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ELMO1Q92556 727 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 SEMA3CQ99985 751 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 EPB41L4BQ9H329 900 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ZFP14Q9HCL3 533 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 XPR1Q9UBH6 696 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 SCAMP3O14828 347 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 MTA2O94776 668 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 ERCC2P18074 760 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 EPS8Q12929 822 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 FOXR2Q6PJQ5 311 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 PLPPR4Q7Z2D5 763 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 KRT73Q86Y46 540 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 BPIFB6Q8NFQ5 453 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 PTCD3Q96EY7 689 aaKnown RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 TMCO1Q9UM00 188 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 SPATA2Q9UM82 520 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 EFCAB10A6NFE3 127 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 FAM47E-STBD1D6RA91 191 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 TNK2Q07912 1038 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 PPM1LQ5SGD2 360 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 PPP1R26Q5T8A7 1209 aaPredicted RBP14.06□□□□□ -0.16
PRKCB-201ENST00000303531 C4orf32Q8N8J7 132 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 NETO2Q8NC67 525 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 DNMT3LQ9UJW3 386 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 COG5Q9UP83 839 aa14.06□□□□□ -0.16
PRKCB-201ENST00000303531 PAPSS1O43252 624 aaPredicted RBP14.05□□□□□ -0.16
PRKCB-201ENST00000303531 TTPAP49638 278 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 STX4Q12846 297 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 GCNT7Q6ZNI0 430 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 RCN3Q96D15 328 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 SLC4A9Q96Q91 983 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 ENTPD4Q9Y227 616 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 CLUHO75153 1309 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 SPATA31C2B4DYI2 1134 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 HGFP14210 728 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 HNRNPLP14866 589 aaKnown RBP eCLIP14.05□□□□□ -0.163e-7■■■□□ 19.2
PRKCB-201ENST00000303531 MAPKAPK3Q16644 382 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 CDC73Q6P1J9 531 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 CACTIN-AS1Q8N1I8 211 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 UXS1Q8NBZ7 420 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 IKZF4Q9H2S9 585 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 HMG20AQ9NP66 347 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 LOC100506127A0A0U1RQW1 187 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 ANKDD1BA6NHY2 528 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 CLDN5O00501 218 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 PGM3O95394 542 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 MATKP42679 507 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 ITGA1P56199 1179 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 MAXP61244 160 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 SCIMPQ6UWF3 145 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 DSG4Q86SJ6 1040 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 RDH11Q8TC12 318 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 FNIP1Q8TF40 1166 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 PCDHB18PQ96TA0 734 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 SLC17A7Q9P2U7 560 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
PRKCB-201ENST00000303531 GSTT1P30711 240 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 HYIQ5T013 277 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 FBXL19Q6PCT2 694 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 ULK2Q8IYT8 1036 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 UBASH3BQ8TF42 649 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 UROC1Q96N76 676 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 ATP12AP54707 1039 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 PTPRNQ16849 979 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 HECTD3Q5T447 861 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 CXCL17Q6UXB2 119 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 PALB2Q86YC2 1186 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 CDYL2Q8N8U2 506 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 JOSD2Q8TAC2 188 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 SLC4A5Q9BY07 1137 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 NLNQ9BYT8 704 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 PIRTP0C851 137 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 GSTA3Q16772 222 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms