RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CAMTA2O94983 1202 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 FDPSP14324 419 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ATXN1P54253 815 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 PFKFB4Q16877 469 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 SBK1Q52WX2 424 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 FNBP1LQ5T0N5 605 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 C1orf189Q5VU69 101 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 SULT1C3Q6IMI6 304 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 TCEAL6Q6IPX3 200 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 KIAA1324Q6UXG2 1013 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 L1RE1Q9UN81 338 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 SCAF8Q9UPN6 1271 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 MYO3AQ8NEV4 1616 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ADGRB1O14514 1584 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 OPLAHO14841 1288 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ERAL1O75616 437 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 SERPINB7O75635 380 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 CDK16Q00536 496 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 MPP2Q14168 576 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 MAPKAPK3Q16644 382 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 FAM171A1Q5VUB5 890 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 PTCD2Q8WV60 388 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 CHMP1AQ9HD42 196 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 TFECO14948 347 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 STAG3L4Q8TBR4 150 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 FAR1Q8WVX9 515 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 SMARCD1Q96GM5 515 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 POP1Q99575 1024 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 AASDHPPTQ9NRN7 309 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ZNHIT2Q9UHR6 403 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ITGA11Q9UKX5 1188 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 FAM172BPA6NC97 362 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 AMPD1P23109 780 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 MMP13P45452 471 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 CDKL1Q00532 357 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 CBX3Q13185 183 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 NAB1Q13506 487 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 APTXQ7Z2E3 356 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 TMC3Q7Z5M5 1100 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 SNX20Q7Z614 316 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 SFRP1Q8N474 314 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ANKRD7Q92527 254 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 LENG9Q96B70 501 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ALG9Q9H6U8 611 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 FBXO28Q9NVF7 368 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 DDX20Q9UHI6 824 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 GNPTGQ9UJJ9 305 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 ST3GAL5Q9UNP4 418 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 OAS3Q9Y6K5 1087 aaKnown RBP10.47□□□□□ -0.73
CLIP1-201ENST00000302528 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
CLIP1-201ENST00000302528 RIPK2O43353 540 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 METTL18O95568 372 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 UBA1P22314 1058 aaKnown RBP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ACAT1P24752 427 aaKnown RBP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 MAGEA2P43356 314 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 NPTX2P47972 431 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 RUNDC3AQ59EK9 446 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 RAET1GQ6H3X3 334 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 SLC47A2Q86VL8 602 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 PARP8Q8N3A8 854 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 GRIN3AQ8TCU5 1115 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 STK32AQ8WU08 396 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 PIH1D2Q8WWB5 315 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 TBCBQ99426 244 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 TRIM2Q9C040 744 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 POLR1EQ9GZS1 481 aaKnown RBP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 IKZF2Q9UKS7 526 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 PHF24Q9UPV7 400 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 BAIAP2Q9UQB8 552 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 PEX11AO75192 247 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 KCNA5P22460 613 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 TAS2R41P59536 307 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 NFIXQ14938 502 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 BMT2Q1RMZ1 405 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF613Q6PF04 617 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 TPGS1Q6ZTW0 290 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 TTC7BQ86TV6 843 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF557Q8N988 423 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 GPR156Q8NFN8 814 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 MTG1Q9BT17 334 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 DCLK3Q9C098 648 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 LEF1Q9UJU2 399 aaPredicted RBP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 TSPAN16Q9UKR8 245 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 C15orf41Q9Y2V0 281 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ABCA9Q8IUA7 1624 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF208O43345 1280 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 CBX6O95503 412 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 GNRH1P01148 92 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 RB1P06400 928 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 CSF1RP07333 972 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 CSH1P0DML2 217 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 CSH2P0DML3 217 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 YBX3P16989 372 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLIP1-201ENST00000302528 NR2C2P49116 596 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 PFKPQ01813 784 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ABRQ12979 859 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 SLC15A2Q16348 729 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 ERICH5Q6P6B1 374 aa10.46□□□□□ -0.73
CLIP1-201ENST00000302528 GALNT18Q6P9A2 607 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms