RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 FUT11Q495W5 492 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 ASTLQ6HA08 431 aaPredicted RBP13.14□□□□□ -0.31
CCDC7-202ENST00000302316 NAT16Q8N8M0 369 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 PPHLN1Q8NEY8 458 aaKnown RBP13.14□□□□□ -0.31
CCDC7-202ENST00000302316 ST13P5Q8NFI4 369 aaPredicted RBP13.14□□□□□ -0.31
CCDC7-202ENST00000302316 NUDCD1Q96RS6 583 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 ARNT2Q9HBZ2 717 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
CCDC7-202ENST00000302316 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 CLDND1Q9NY35 253 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 LHX3Q9UBR4 397 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 SOX13Q9UN79 622 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 IKBKGQ9Y6K9 419 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 MIA3Q5JRA6 1907 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 FAM237BA0A1B0GVD1 139 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 K7ERQ8 282 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 ADH1CP00326 375 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 C1QAP02745 245 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 INHBAP08476 426 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 ADH5P11766 374 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 DLX2Q07687 328 aaPredicted RBP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SEPT6Q14141 434 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 TNFAIP8L3Q5GJ75 292 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 PCID2Q5JVF3 399 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SIRPB2Q5JXA9 342 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 UNC5BQ8IZJ1 945 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 CYP4X1Q8N118 509 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 PPM1NQ8N819 430 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 FEM1CQ96JP0 617 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 DHRS4Q9BTZ2 278 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 TM6SF2Q9BZW4 377 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 TRPV4Q9HBA0 871 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 MOCS1Q9NZB8 636 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SZT2Q5T011 3432 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 CCDC78A2IDD5 438 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 FAM159BA6NKW6 160 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SMAD6O43541 496 aaKnown RBP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 ALDH1A2O94788 518 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 ATXN1LP0C7T5 689 aaKnown RBP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 HLA-DPA1P20036 260 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 FCARP24071 287 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 GALNT3Q14435 633 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 RASA2Q15283 850 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SMAD1Q15797 465 aaKnown RBP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 ANKRD20A4Q4UJ75 823 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 METTL3Q86U44 580 aaKnown RBP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 TMEM135Q86UB9 458 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 LRRC6Q86X45 466 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 DCAKDQ8WVC6 231 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 SLC44A1Q8WWI5 657 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 CDKL2Q92772 493 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 TTC17Q96AE7 1141 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 MFSD3Q96ES6 412 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 ZFYVE19Q96K21 471 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 FCRL3Q96P31 734 aaPredicted RBP13.13□□□□□ -0.31
CCDC7-202ENST00000302316 KIFC1Q9BW19 673 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 OBP2AQ9NY56 170 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
CCDC7-202ENST00000302316 MYOFQ9NZM1 2061 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 CXorf49A8MYA2 514 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 NFATC1O95644 943 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 FGF1P05230 155 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 ARSAP15289 507 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 CTSOP43234 321 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 SLC20A2Q08357 652 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 NSUN2Q08J23 767 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 ATXN7L2Q5T6C5 722 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 TANGO2Q6ICL3 276 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 PKN3Q6P5Z2 889 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 ADGRD1Q6QNK2 874 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 CYS1Q717R9 158 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 TAOK1Q7L7X3 1001 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 RASSF3Q86WH2 238 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 PTCD2Q8WV60 388 aaKnown RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 CERS2Q96G23 380 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 RPL10LQ96L21 214 aaKnown RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 RIPOR3Q96MK2 946 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 TDRD1Q9BXT4 1180 aaKnown RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 SLC2A11Q9BYW1 496 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 S1PR5Q9H228 398 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 TTYH1Q9H313 450 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 ZFP14Q9HCL3 533 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 THG1LQ9NWX6 298 aaKnown RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 IL1RAPL1Q9NZN1 696 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 MTCH2Q9Y6C9 303 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 ZCWPW2A0A1B0GU75 182 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 HOXC11O43248 304 aaPredicted RBP13.12□□□□□ -0.31
CCDC7-202ENST00000302316 EPOP01588 193 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 KRT15P19012 456 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 ADRA1DP25100 572 aa13.12□□□□□ -0.31
CCDC7-202ENST00000302316 NMBRP28336 390 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms