RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 JUPP14923 745 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 CKMT2P17540 419 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 NDST2P52849 883 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 ZNF211Q13398 564 aaPredicted RBP18.5■□□□□ 0.55
TMEM88-201ENST00000301599 ILKQ13418 452 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 FGL2Q14314 439 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 FIGNQ5HY92 759 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 PROSER1Q86XN7 944 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 NCAPGQ9BPX3 1015 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 FUCA2Q9BTY2 467 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 CPEB1Q9BZB8 566 aaKnown RBP18.5■□□□□ 0.55
TMEM88-201ENST00000301599 DHX35Q9H5Z1 703 aaKnown RBP18.5■□□□□ 0.55
TMEM88-201ENST00000301599 CNOT8Q9UFF9 292 aaKnown RBP18.5■□□□□ 0.55
TMEM88-201ENST00000301599 PCSK1NQ9UHG2 260 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 IPO11Q9UI26 975 aaKnown RBP18.5■□□□□ 0.55
TMEM88-201ENST00000301599 AP4E1Q9UPM8 1137 aa18.5■□□□□ 0.55
TMEM88-201ENST00000301599 COL5A1P20908 1838 aaPredicted RBP18.49■□□□□ 0.55
TMEM88-201ENST00000301599 POM121BA6NF01 834 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 TRABD2BA6NFA1 517 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 EEF2KO00418 725 aaKnown RBP18.49■□□□□ 0.55
TMEM88-201ENST00000301599 DDX3XO00571 662 aaKnown RBP eCLIP18.49■□□□□ 0.55
TMEM88-201ENST00000301599 FPGTO14772 594 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 PRPSAP2O60256 369 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 MYBL1P10243 752 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 SKILP12757 684 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 DGKAP23743 735 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 ABL2P42684 1182 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 ACADVLP49748 655 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 CYTH1Q15438 398 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 ARFGAP1Q8N6T3 406 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 PDCD7Q8N8D1 485 aaKnown RBP18.49■□□□□ 0.55
TMEM88-201ENST00000301599 HCAR2Q8TDS4 363 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 FNIP1Q8TF40 1166 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 VOPP1Q96AW1 172 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 TRIM11Q96F44 468 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 MRPL47Q9HD33 250 aaKnown RBP18.49■□□□□ 0.55
TMEM88-201ENST00000301599 GPATCH2LQ9NWQ4 482 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 DKK3Q9UBP4 350 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 UBA2Q9UBT2 640 aaPredicted RBP18.49■□□□□ 0.55
TMEM88-201ENST00000301599 SCINQ9Y6U3 715 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 CHD5Q8TDI0 1954 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 PLXNB3Q9ULL4 1909 aa18.49■□□□□ 0.55
TMEM88-201ENST00000301599 FAM149AA5PLN7 773 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 NEMP2A6NFY4 417 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 ARHGAP42A6NI28 874 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 AREL1O15033 823 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 RAD51BO15315 384 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 ATMINO43313 823 aaPredicted RBP18.48■□□□□ 0.55
TMEM88-201ENST00000301599 SIGLEC6O43699 453 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 HNF1BP35680 557 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 RABIFP47224 123 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 SUOXP51687 545 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 ZNF135P52742 658 aaPredicted RBP18.48■□□□□ 0.55
TMEM88-201ENST00000301599 CAMK2BQ13554 666 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 GRM3Q14832 879 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 KYAT3Q6YP21 454 aaKnown RBP18.48■□□□□ 0.55
TMEM88-201ENST00000301599 PTAR1Q7Z6K3 402 aaPredicted RBP18.48■□□□□ 0.55
TMEM88-201ENST00000301599 DNAAF5Q86Y56 855 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 MARCH9Q86YJ5 346 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 PSTKQ8IV42 348 aaKnown RBP18.48■□□□□ 0.55
TMEM88-201ENST00000301599 NETO2Q8NC67 525 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 KLF6Q99612 283 aaPredicted RBP18.48■□□□□ 0.55
TMEM88-201ENST00000301599 ISCUQ9H1K1 167 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 LRRC19Q9H756 370 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 CBX8Q9HC52 389 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 DKK4Q9UBT3 224 aa18.48■□□□□ 0.55
TMEM88-201ENST00000301599 BZW2Q9Y6E2 419 aaKnown RBP18.48■□□□□ 0.55
TMEM88-201ENST00000301599 TRPM6Q9BX84 2022 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 SPTY2D1-AS1A0A0U1RR47 76 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 TRIM38O00635 465 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 PRAMEF11O60813 436 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 PIAS2O75928 621 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 TIMP2P16035 220 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 ACP1P24666 158 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 MIPP30301 263 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 HCAR3P49019 387 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 HNRNPKP61978 463 aaKnown RBP eCLIP18.47■□□□□ 0.55
TMEM88-201ENST00000301599 FANCCQ00597 558 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 ACAP1Q15027 740 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 CA9Q16790 459 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 PROX2Q3B8N5 592 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 E4F1Q66K89 784 aaPredicted RBP18.47■□□□□ 0.55
TMEM88-201ENST00000301599 SLC22A18ASQ8N1D0 253 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 DENND6BQ8NEG7 585 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 OR4C6Q8NH72 309 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 MDM1Q8TC05 714 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 SYN2Q92777 582 aaPredicted RBP18.47■□□□□ 0.55
TMEM88-201ENST00000301599 ZNF653Q96CK0 615 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 SNRNP25Q9BV90 132 aaKnown RBP18.47■□□□□ 0.55
TMEM88-201ENST00000301599 SLC39A8Q9C0K1 460 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 UCKL1Q9NWZ5 548 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 DNAJC28Q9NX36 388 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 GGT7Q9UJ14 662 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 PTPRBP23467 1997 aa18.47■□□□□ 0.55
TMEM88-201ENST00000301599 TP53BP1Q12888 1972 aaPredicted RBP18.46■□□□□ 0.55
TMEM88-201ENST00000301599 GOLGA4Q13439 2230 aaKnown RBP18.46■□□□□ 0.55
TMEM88-201ENST00000301599 SYCE3A1L190 88 aa18.46■□□□□ 0.55
TMEM88-201ENST00000301599 J3KR12 359 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms